Gene Dvul_2246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2246 
SymbolpurT 
ID4663787 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2609563 
End bp2610744 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content66% 
IMG OID639820491 
Productphosphoribosylglycinamide formyltransferase 2 
Protein accessionYP_967689 
Protein GI120603289 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0027] Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) 
TIGRFAM ID[TIGR01142] phosphoribosylglycinamide formyltransferase 2 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA TAGGCACTCC CCTCACCCCT ACGGCGACCC GCATCCTGCT GCTCGGTTCC 
GGCGAACTCG GACGCGAGGT GGCGCTCGAG GCCATGCGCC TCGGCGTCGA AGTCGTGGCC
GTCGACCGCT ATCCCAACGC CCCCGCCATG CAGGTGGCGC ATCGCAGCCA TGTGGTGTCC
ATGCTCGACG GTGCGGCCCT GCGTGCCATC ATCGAGGCGG AGAAGCCCTA CTGCATCGTG
CCCGAAATCG AGGCCATCGC CACCGGTACG TTGCTGGAAC TGGAACAGGA AGGCTACCGG
GTGGTGCCCA CCGCCCGTGC CGCGCGCCTG ACCATGGACA GGGAGGGAAT ACGCCGCCTT
GCCGCCGAAG AGCTTGGCCT GCCTACGTCG CCGTACCGTT TCGCCTCCAC CGAAGAGGAA
TATCGCGCCG CCATCGAGAC AGTGGGGTTG CCCTGCGTGG TGAAGCCGGT CATGAGTTCG
TCGGGCAAAG GACAGAGCCT TGTGCGCACC CCGGCCGACA TCGACTCGGC ATGGGCCTAT
GCACAGACCG GCGGGCGTGC CGGGGCGGGG CGGGTCATCG TGGAGGGGTT CGTCGATTTC
GACTATGAAA TCACCCTGCT GACCGTGCGT CATGCCGGAG GCGTCACATT CTGCGACCCC
ATCGGGCATT TGCAGAAGGA TGGCGACTAT CGCGAATCGT GGCAGCCGCA GCCTATGGAT
GCCGTGGCGC TGGAGAAGGC CCGTGCCATG GCCGACGCCG TAACCGGTGC GCTTGGTGGC
TGGGGCATCT TCGGTGTGGA ACTTTTCGTA CGCGGTGACG AGGTGTGGTT CAGCGAGGTC
TCGCCCCGTC CTCACGACAC CGGGCTGGTG ACCCTCATCT CGCAGAACAT GAGCGAATTC
GCCTTGCATG TGCGCGCCAT CCTCGGGCTG CCGGTGCCGT TGCTGCGGCA GAATGGCCCT
GCCGCCTCGT GCGTCATCCT TGCCGAGGGC GATTCCGAGG CCCCCCGCTT CCATGGCGTG
GATGCGGCAT TGGCCGAACA GGACACCGCC CTCTGCCTCT TCGGCAAGCC CGAAGTGCAT
GGCAGGCGGC GCATGGGCGT CGCCCTTGCG CTGGGCGATG ACATCGACGC AGCCCGCGCC
AAGGCCCGCA GGGCCGCCGG GAGCGTGACT GTGGAATTGT AG
 
Protein sequence
MASIGTPLTP TATRILLLGS GELGREVALE AMRLGVEVVA VDRYPNAPAM QVAHRSHVVS 
MLDGAALRAI IEAEKPYCIV PEIEAIATGT LLELEQEGYR VVPTARAARL TMDREGIRRL
AAEELGLPTS PYRFASTEEE YRAAIETVGL PCVVKPVMSS SGKGQSLVRT PADIDSAWAY
AQTGGRAGAG RVIVEGFVDF DYEITLLTVR HAGGVTFCDP IGHLQKDGDY RESWQPQPMD
AVALEKARAM ADAVTGALGG WGIFGVELFV RGDEVWFSEV SPRPHDTGLV TLISQNMSEF
ALHVRAILGL PVPLLRQNGP AASCVILAEG DSEAPRFHGV DAALAEQDTA LCLFGKPEVH
GRRRMGVALA LGDDIDAARA KARRAAGSVT VEL