Gene Dvul_2170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2170 
Symbol 
ID4664841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand+ 
Start bp2522395 
End bp2523435 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content65% 
IMG OID639820414 
ProducttRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 
Protein accessionYP_967613 
Protein GI120603213 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG CCGTCGCCAT GAGCGGAGGC ACCGACAGCC TGTTCGCCCT CGTCCTCCTC 
AAGGAACAGG GCCAGCAGGT GTGCGGTCTT CATGCCCGCT TCATCCCCCC GACGGGGCAC 
GACCCCGTGC CCGATATCCG GGCCATGTGC GACCGACTCG GGGTCGACCT TCATGTCGTC 
GACCTCACGG AGGCGTTCGA GGAACATGTC GTGCGCCCCT TCATGGAAGA CTACATGGTG 
GGACGCACTC CCAATCCCTG CGCACGGTGC AACGCCACCA TGAAGTTCGG CCTTCTTGCC 
GATGCCGCCG CACACGTCGG TGCCGTGCAC CTAGCCACCG GCCATTACGC CCGCCTGCTC 
AGGCATCCCC GATGGGGCAC AGTGCTGCAA CGCGGTGTCG ACCCGGCGAA GGACCAGAGC 
TATTTTCTCT CACTCGTACC GCATGCCCGC CTTGAAAAGG CAGTCTTCCC CCTCGGCAAC 
TGGCGCAAGG AGGCGGTGCG GGGTGAGCTT GCCAGACGCA GCATCGTGCC GCCACTGCCT 
TCCGAGAGTC AGGAGATATG CTTCGTCCCC GACGATGACT ACCGCGCCTT TCTCAAGAAC 
CGACGTGTCC GGCTTCCCGG CCCCGGCCCC ATCGTCACGA CACGCGGCCG CAAGATAGGC 
AGCCACGCCG GACTCTGGCA GTACACCGAA GGCCAGCGAA AGGGGCTTGG CATCGCATGG 
CACGAACCGC TGTATGTCGT TGGCAAGGAC ATGGAGAACA ACATGCTGCT GGTGGGAGGG 
CGCGAAGCAC TGGCCTCACC AGGCTGCGTC GCCGAAGAGG TCAACCTGCT CGTACCTTAC 
GAAGACTGGC CTGCCGAGGT CGCCGTGCGC ATCCGCTACC GGCAGCAGCC CCTCTCCGCG 
CGGGTGACCC TGCGCGACGG CAGACTGTAC GCCCGCTTCC GTGAACCTCA GCCGCCTGCC 
GCGCGCGGTC AGGTACTGGC GGTCTACGAC ATGGAGCACC ATGTGCTGGG TGGAGGCGTC 
ATTCTCGGCC CGCTGCCCTG A
 
Protein sequence
MTIAVAMSGG TDSLFALVLL KEQGQQVCGL HARFIPPTGH DPVPDIRAMC DRLGVDLHVV 
DLTEAFEEHV VRPFMEDYMV GRTPNPCARC NATMKFGLLA DAAAHVGAVH LATGHYARLL 
RHPRWGTVLQ RGVDPAKDQS YFLSLVPHAR LEKAVFPLGN WRKEAVRGEL ARRSIVPPLP 
SESQEICFVP DDDYRAFLKN RRVRLPGPGP IVTTRGRKIG SHAGLWQYTE GQRKGLGIAW 
HEPLYVVGKD MENNMLLVGG REALASPGCV AEEVNLLVPY EDWPAEVAVR IRYRQQPLSA 
RVTLRDGRLY ARFREPQPPA ARGQVLAVYD MEHHVLGGGV ILGPLP