| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2141 |
|---|
| Symbol | |
|---|
| ID | 4664593 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 2487425 |
|---|
| End bp | 2488951 |
|---|
| Gene Length | 1527 bp |
|---|
| Protein Length | 508 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639820384 |
|---|
| Product | signal recognition particle protein |
|---|
| Protein accession | YP_967584 |
|---|
| Protein GI | 120603184 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0541] Signal recognition particle GTPase |
|---|
| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCGACA GTCTATCCGA CAGACTTACG CAAGCGTTCC GCAAATTCAG CGGACAGAGC
CAACTCGACG AGAACAACAT CCAGGAAGGC CTGCGCGAAG TGCGTCTCGC CCTGCTGGAG
GCCGACGTCA ATTTCAAGGT CGTCAAGGAT TTCATCGATC GGGTCAAGGA ACGCTGCCTC
GGACAGGACG TACTCAAGAG CCTCACCCCG GCACAACAGG TCGTCAAGGT CGTCCACGAC
GAGCTTGTCG AACTTCTGGG CGGCGGCACC ACCGAACTCG ACCTGCGCGG GGCACAGCCC
GGTGTGATCA TGATGGTGGG CCTGCAGGGT TCGGGTAAGA CCACCTCGTC CGCCAAGATC
GCCAACCTGC TGCGCAAGCG CAAGATGCGT CCGTATCTCG TGCCTGTCGA CGTATACCGC
CCTGCGGCCA TCGACCAGCT CGTGACGCTG GCCCGACAGC TCGATATACC ATATTATCAG
TCCACGCCGG ACATGAAGCC GCTGGACATC GTCCGTGCGG CCCTCGCCGA CGCGAAAGAG
AAGCAGTGCA CCGCCGTACT GCTCGACACA GCAGGCCGTC TGCACGTCGA CGAAGCCCTG
ATGGACGAAC TGGCGGCCCT CAAGGCCACC TTCTCGCCGC AGGAGATTCT CTTCGTGGCG
GACGCCATGA CGGGTCAGGA TGCCGTCACG GTGGCCGATG CCTTCAACGA GAAGCTGGGC
ATCACCGGTG TCGTGCTCAC CAAGATGGAC GGTGACGCCC GCGGCGGCGC GGCCCTTTCC
ATCAAATCGG TGACGGGGGC CTCGGTCAAG TACGTCGGCA TAGGCGAAAA ACTTTCGGAC
ATCGAGGTCT TCCACCCCGA CCGTGTTGCG GGGCGCATTC TCGGCATGGG CGACATGCTC
ACCCTCATCG AGAAGGCCCA GAGCACCATC GAAGCGGACG AGGCGGAGGC CCTCACCAAG
AAATTCCAGC GCGCTTCATT CGACCTCGAA GACTTCCGCA CCCAGATGCG CCGCATGAAG
AAGCTGGGTT CGCTCGAAGG CATCCTCAAG ATGATTCCCG GCATGGGCGC CCTGCGCGAC
AAGCTTGGAC AGATGAGCGT GCCCGAGAAG GACATGGCCC GCATCGAGGC CATCATAAGC
TCCATGACCA TGAAGGAGCG GCGCAACCCC GACGTCATCA ACGGCAGTCG CCGCGCACGC
ATCGCCAAGG GGTCGGGCAC CACGGTGCAG GAGGTCAACC AGCTTCTGCG GAATTTCGAG
CAGATGCGCG AGATGATGAA GCGTGTCATG AATATGGGCA AGCCCGGCGG CGGCCGCATG
CCCCGTATCC CCGGTATGGG GGGTATGGGT GGCATGGGCG GCGGCATGGG GGGTCTCGGT
GGACTGGGGG GGCTTGGCGG CCTCGGCGGT CTCGGAGGCG GAATGCCCGG CATGGGCGGA
CTCCCCGGCA TGGGGGGGCT GCCCGGTGGC TCTTCGGCCA CCAAGAAGAA GAAACAGCGC
GACAAGAAGA AGCGCAAGAA ACGTTGA
|
|---|
| Protein sequence | MFDSLSDRLT QAFRKFSGQS QLDENNIQEG LREVRLALLE ADVNFKVVKD FIDRVKERCL
GQDVLKSLTP AQQVVKVVHD ELVELLGGGT TELDLRGAQP GVIMMVGLQG SGKTTSSAKI
ANLLRKRKMR PYLVPVDVYR PAAIDQLVTL ARQLDIPYYQ STPDMKPLDI VRAALADAKE
KQCTAVLLDT AGRLHVDEAL MDELAALKAT FSPQEILFVA DAMTGQDAVT VADAFNEKLG
ITGVVLTKMD GDARGGAALS IKSVTGASVK YVGIGEKLSD IEVFHPDRVA GRILGMGDML
TLIEKAQSTI EADEAEALTK KFQRASFDLE DFRTQMRRMK KLGSLEGILK MIPGMGALRD
KLGQMSVPEK DMARIEAIIS SMTMKERRNP DVINGSRRAR IAKGSGTTVQ EVNQLLRNFE
QMREMMKRVM NMGKPGGGRM PRIPGMGGMG GMGGGMGGLG GLGGLGGLGG LGGGMPGMGG
LPGMGGLPGG SSATKKKKQR DKKKRKKR
|
|---|
| |