| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2090 |
|---|
| Symbol | |
|---|
| ID | 4663204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 2430358 |
|---|
| End bp | 2431422 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639820333 |
|---|
| Product | chorismate synthase |
|---|
| Protein accession | YP_967533 |
|---|
| Protein GI | 120603133 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0082] Chorismate synthase |
|---|
| TIGRFAM ID | [TIGR00033] chorismate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0281395 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0647066 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGGCA ACACACTGGG ACGTCTTTTC AGGCTGACGA CCTACGGCGA ATCGCACGGC
GCAGGGCTTG GTGGCGTCAT CGACGGCTGC CCGGCAGGCA TTGCGCTGGA CGAGGCCGTC
ATCCAGCGTG AACTCGACCT TCGCCGCCCC GGTGGCAACT CCGCCTCGAC CACCCGGCAG
GAACCCGACA GGGTGCGTCT GCTTTCGGGC GTGTTCGAGG GGGTGACCAC CGGAACGCCC
ATCGCCTTCC ACGTGGAGAA CGTCGACCAG CGTTCGCGCG ACTATGGCGA GATAGCCCGG
TTGTACAGGC CGGGTCATGC CGATTTCACC TACGACGCCA AGTTCGGCGT ACGCGACTAT
CGCGGCGGCG GTCGCGCCTC CGGGCGTGAG ACCCTCTCGC GCGTGGCGGG CGGTGCCATC
GCGCAGGCGC TGCTGGCCCG CCATGGCATC GCGGTGCGGG CCTTCACCGT GGAACTTGGC
GGCGTACCCG CCGACCTCGT GGACGTGGCG GGGGCGCAGC TACGTCCGTT CTTCTCGCCC
GACCCCGATG TGGTGGAGGC GTGGGAGGAC ATGGTGCGCA CGGTGAAGGG CGAAGGCGAT
ACCCTCGGCG GCATCGTGCA GGTCGAGGCC ACGGGAGTCC CCGCCGGTCT GGGCGAACCC
GTGTTCGACA AGCTGGACGC CGTGCTTGCC TATGCGCTCA TGTCCGTAGG GGCGGTGAAG
GGCGTCGAGG TCGGCGCCGG GTTCGAGGCC GCGCGGATGC ACGGCAGCGA CAACAACGAC
CCCATCGTGC CCAGCGGTTT CTTCACCAAC CATGCGGGCG GCATTCTCGG CGGCATCTCC
AACGGAGAGA CCATCGTCCT GCGCGCGGCG GTGAAGCCCA TCCCCTCCAT CGCGCAAGAG
CAGATAACCA TCGACCGCGA CGGCAAGCCC TCGGCCCTGT TCATCGCCGG ACGGCACGAC
ATTAGCGCGA TTCCGCGCAT CGTGCCTGTG CTCAAGGCCA TGACCGCACT CGTGCTGGCC
GACATGCTGC TCATGCAGCG CCGCATGGCA ACGCCGCAGC CCTAG
|
|---|
| Protein sequence | MSGNTLGRLF RLTTYGESHG AGLGGVIDGC PAGIALDEAV IQRELDLRRP GGNSASTTRQ
EPDRVRLLSG VFEGVTTGTP IAFHVENVDQ RSRDYGEIAR LYRPGHADFT YDAKFGVRDY
RGGGRASGRE TLSRVAGGAI AQALLARHGI AVRAFTVELG GVPADLVDVA GAQLRPFFSP
DPDVVEAWED MVRTVKGEGD TLGGIVQVEA TGVPAGLGEP VFDKLDAVLA YALMSVGAVK
GVEVGAGFEA ARMHGSDNND PIVPSGFFTN HAGGILGGIS NGETIVLRAA VKPIPSIAQE
QITIDRDGKP SALFIAGRHD ISAIPRIVPV LKAMTALVLA DMLLMQRRMA TPQP
|
|---|
| |