| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2080 |
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| Symbol | |
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| ID | 4663820 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 2418998 |
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| End bp | 2420740 |
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| Gene Length | 1743 bp |
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| Protein Length | 580 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639820323 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_967523 |
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| Protein GI | 120603123 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0780382 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCGG CACATACATA CGGACACATG AAACGCTGGA TATACCGACC GGAGGTGGAA
GGCGCACTGC CGCCATCCGC CTCTCTCGCC GAACGTCTCG GCATCTCGGA CCTGCTGCTT
CGCCTGTTGC TGCGGCGCGG CCTTTCATCC GTTCAGGATA TGGACGTCTA CCTCAGCCCG
CAGTTGCGCC ACCTCGCCCC GCTGGAGGAA TGGCCCGGCC TTGCTGAAGC GGCTGGCGTC
ATCACGGCGG GCATCACCGC CGGGATGCCC TTTGCCGTAT GGGGCGACTA TGACGTGGAC
GGGGTGACCT CCACAGCCCT TGTGCATGAC GTACTCGAGT TCCATGGCGT GGATGTGCGC
CACCATCTCC CCGACCGGCG GGCCGAGGGC TACGGGCTGA ATGTGGAGTG GATAGAGAGG
CTCGCTGCCG ATGGGGTGCG TCTGCTTCTC ACGGTGGACT GCGGCATATC CGATGTCGTG
CCCATCTCAC GAGCCCGTGA ACTGGGCATG ACCGTGGTCG TCTCCGACCA CCACCTGCCG
CCGGAGGTCT TGCCGCCCGC CCATGCCATC TGCAATCCGC GTCTCGCCTG TTGTCCGTGT
CCGGCGCTGG CGGGCGTGGG GGTCGCGTTC TTCGTCATGG CGGCGGTCAA TGCCGCATTG
GGAGAACGCT CCGGCAGGCG TTACGACATG CGCGAGGTGC TCGACCTTGT GGCGTTGGGG
ACGCTGGCGG ATGTGGTCGA CCTCGGTGGT CAGAATCGCA TCCTCGTCAA GAACGGACTC
CTGAAAATAG CCGAAGCCCG CAGGCCGGGC ATGGCGGCGC TCAAGGCAGT TGCGGGCTAC
AATCCATCGG CCTCGCTGGG GGCGGGGCAG GTGGTGTTCG GGCTTGCGCC GCGCATCAAT
GCGGCTGGTC GCCTTGGCGA GGCGGAGATG GCACTGCAAC TGTTGCGTGC CCGCAATCAT
GGTGAGGCGG CGCAGCTTGC GCAGCGCCTT GACGCCATGA ACACCGACCG CCGTGTGGAG
GAGGATCGCA TCCTCGAAGA GGCGAAACGG CAGGCCGAGT CGCAAGCCGC GTCGCGCATG
GGGTTCGTGC TCCATGGCGA GGACTGGCAC CCCGGCGTCA TCGGCATCGT CGCCTCGCGC
ATCGTGGAGG CCTACTACAG GCCCACACTC ATCCTGTGCA CAGAAGGGGA GACGTTGAAG
GGGTCGGGGC GTTCGGTGTC GGAATTCGAC CTGCATGCAG GGCTTTCACA GTGCGCCGAC
CTGTTCCTTG GCTTCGGGGG GCACAGGCAG GCCGCCGGCA TGAGCCTGAA GACCTCGGCG
CTCGATGCAT TGCGGGAACG GTTCGATACC GTGGTGCGTC AGGCCCTCGG CGATACGCCG
TTGACGGCAT CGCTGAAGCT GGATGGCGAC CTCGGCTTCG AGCACGCTTC GGATTTCACG
GTGCTCAAGG AACTCGAGAT GTTGCAGCCT TTCGGCACAG GCAACGCCGA ACCCGTCTTC
GCGTCGCCTC CGCTTCTTGT GCGCGGGTTG CGACGCTTCG GCAAGGCGCG GGAACATGTG
GAACTCGAAC TCACCGACGA GTCGTGCGGG GTGACGCTGC ATGCCAAGGC ATGGCGGCAG
TCCGGAGAAT TCTCCGACAG GCTGCGTGGA ACGCGGATAC GCCTCGCCTA CACGCCGCGC
ATCGACAGGT ATTCCGGTGC GGCGTCCGTC GACTTGCGGA TACGAGACTG GCAACCCGCG
TGA
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| Protein sequence | MASAHTYGHM KRWIYRPEVE GALPPSASLA ERLGISDLLL RLLLRRGLSS VQDMDVYLSP
QLRHLAPLEE WPGLAEAAGV ITAGITAGMP FAVWGDYDVD GVTSTALVHD VLEFHGVDVR
HHLPDRRAEG YGLNVEWIER LAADGVRLLL TVDCGISDVV PISRARELGM TVVVSDHHLP
PEVLPPAHAI CNPRLACCPC PALAGVGVAF FVMAAVNAAL GERSGRRYDM REVLDLVALG
TLADVVDLGG QNRILVKNGL LKIAEARRPG MAALKAVAGY NPSASLGAGQ VVFGLAPRIN
AAGRLGEAEM ALQLLRARNH GEAAQLAQRL DAMNTDRRVE EDRILEEAKR QAESQAASRM
GFVLHGEDWH PGVIGIVASR IVEAYYRPTL ILCTEGETLK GSGRSVSEFD LHAGLSQCAD
LFLGFGGHRQ AAGMSLKTSA LDALRERFDT VVRQALGDTP LTASLKLDGD LGFEHASDFT
VLKELEMLQP FGTGNAEPVF ASPPLLVRGL RRFGKAREHV ELELTDESCG VTLHAKAWRQ
SGEFSDRLRG TRIRLAYTPR IDRYSGAASV DLRIRDWQPA
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