Gene Dvul_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2050 
Symbol 
ID4662134 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2388848 
End bp2391271 
Gene Length2424 bp 
Protein Length807 aa 
Translation table11 
GC content62% 
IMG OID639820293 
Productmethyl-accepting chemotaxis sensory transducer 
Protein accessionYP_967493 
Protein GI120603093 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0840] Methyl-accepting chemotaxis protein 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.891859 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTATCA GACAGAAACT GTTTCTTCCG TTTGCGTTGG CAGTGTTCAT CCTTGGGGCA 
GGTGCCTACT GGGTGCTCTC AGGTGAACTT CATGCTCTCA AAAGTGTCTT TCTTGAACGC
ATAGCCGAAT CGAAATCGAG CGAACTTGCC CAGAATGTCG AGCTTCTCGG CACGCAAGCA
CTGGAGCAGG CTTCGCTTTT CTCCGCGTTG CCCGTCGTGC AGGAGGCCTA TGCCATCGCC
ATGTCGGGGA ACATCGCCGA CGAGCGTGAT GCCAAAGGCC AAGAGGCGCG TGAACTGCTG
CGCCGTGAAC TCAAGGGGCA CCTTCAGTCG TTCGAGGCGA TCAACGGACG CAAGTTCAAG
CTGCATTTCC ACCTGCCCAA CGGGCGTAGC CTCGTGCGCC TGTGGTCGGC GAAGCAGGTC
AAGCGCGACG GTCAGGGGGT GGACGTTTCC GACGACATCT CGACGTTCAG GCAGACCGTG
GTCGAGGTCA ACCGAAGCGG TCAGCCGCGC AAGGGCATCG AGGTCGGGCG CGGCGGTTTC
GACGTGCGTG GCGTTTCTCC GGTGCGTGAT GCCTCCGGGA AGCAGATAGG TTCCGTCGAA
GTGCTGGTGG AATTCGCGCC CTTGCTCGAA GTCGCATCGC GCGGGCAAGG CGAGGACCTC
ATGCTCTTCA TGAACACCAG CCTGCAGGAC ATCGCCAACG GGATGTCGGA CAGGTCCAAG
CACCCTCTGG TCGGCAGCGA CTTCATGCTG GCCACGGGCA ACCCGAAATC ACCCGCGTTC
GCCAAGGTCT CGCCGCAACT GCTGACGGCG GGACGCACCG GCGTCCACGT CGAGGATGAA
GGCGGAACCG CGCTGATGTC GTTCCCCGTG AAGGACTACA AGGGTGAACA GGTCGGCGTG
TTCGTCTTTG TCATGGACAA CTCGGCTGCG GCAGCCATCT TCGATACCTT CGCCAAGGTG
ATGCTCGTGG CGTTGCTTGC CCTTCTCGTC GTGCCCGGCA TCATCTTCTC CACCTTGCTC
ACCCGCGTCG TGGTCAGACC TGTGGGCAAC GTGGTGCGGC TCATCCGTGA CATCACCGAA
GACAGGGCCA ACCTGAACGA CAGGCTCGCC GATACCGATT CCGGCGAGGT TGGCGAACTG
TGCCGCTGGT TCAACCGGCT CATGGGCAAG ATAGAGGACA TCCTCTGTTC TGTGGAAGGG
TACAAGAACA TCGTCAATGC CATCCCCGAC CCCGTCTTCG CCGTCGATGA CGACTATAAT
ATCCTGCTGG CCAACAACGC CGTCGCAAGG CTTGCAGGAA AGACGGATGG CGAACAGGTG
CGCGGCATGC GGTGCAGTTC CATCTTCAAC ACGTCGGTGT GCGGTACCGA CAGGTGCCCC
ATCTGCCAGG CCCGAACCAA GCAGGGGCGC TACGAGGCCG AAATCATCGA ACTCAACATC
CACGGGAAGA GCCGCTGGAT TCGTCCGTAT GGCGATATCC TGCACGATTG CCACGGGCAA
CGGGCAGGTT ACCTTGAGGT GGCCAGTGAT GTGACGGAAC TCTACCGCAA GGAGACCGAA
CTCAAGGGGC ACATGTCGCG GATGCAGGCG GTCAACACCG AGGTCGTCGA AGTGGCTTCG
CAGGTCGCCG AGGCCTCGGC CAGCATCGAG GAACAGACGC GGCAGGTGCT TTCGAGTGCC
GATTCGCAGC GGCACCTCAT CGCCGAGAGC GTGGGGGCCA TAGGCCAGAT GAACGACACC
ATCATGGAGG TGGCCCGCAG CGCCGCACTC GCTTCGCAAC AGGCCGGAAG CGGACAGACC
AAGGCGCAGG AGGGGTCGCG TATCGTGAGC GACGCGGTGC AGGCCATCGG CACGGTCAGT
CAGCTTTCGG GCGTGTTGCG GACCAACCTC ACCGAGTTGG GCGGGCAGGC CGAATCCATC
GGGCAGATCA TGAACGTCAT TTCCGACATC GCCGACCAGA CCAACCTGCT GGCGCTCAAC
GCCGCCATCG AAGCGGCGCG GGCGGGTGAA GCCGGAAGGG GATTCGCCGT CGTCGCGGAC
GAGGTTCGCA AACTTGCCGA GAAGACCATG AATGCCACGC AAGAGGTGCG CCGTTCCATC
GAGACCATCC AGAGTGGTGC GGCCCGCAAC ATCTCCAGCA TGGAGGAGGT CGCCAGCGCC
GTCGGTCAGG CCACGGTACT GGCTGAACGC TCGGGTACGG CCTTGCGGGA GATCGTCGCA
CTGGTCAACG ACACCTCGTC GCAGGTGACG GCCATCGCCA CCGCTGCCGA GGAACAGTCG
GCTTCGAGTG AGGAGATAAA GCGCAGCGTG GAGCAGGTGA GTGCCCTTTC CGAGGAGACG
GCGCAACGGA TGGAGGATGC CGCCAGAGCA GTCAACGACC TGACGGGGTT GGCGCAACGC
CTCGGTCATC TCTCCCGCAG CTAG
 
Protein sequence
MGIRQKLFLP FALAVFILGA GAYWVLSGEL HALKSVFLER IAESKSSELA QNVELLGTQA 
LEQASLFSAL PVVQEAYAIA MSGNIADERD AKGQEARELL RRELKGHLQS FEAINGRKFK
LHFHLPNGRS LVRLWSAKQV KRDGQGVDVS DDISTFRQTV VEVNRSGQPR KGIEVGRGGF
DVRGVSPVRD ASGKQIGSVE VLVEFAPLLE VASRGQGEDL MLFMNTSLQD IANGMSDRSK
HPLVGSDFML ATGNPKSPAF AKVSPQLLTA GRTGVHVEDE GGTALMSFPV KDYKGEQVGV
FVFVMDNSAA AAIFDTFAKV MLVALLALLV VPGIIFSTLL TRVVVRPVGN VVRLIRDITE
DRANLNDRLA DTDSGEVGEL CRWFNRLMGK IEDILCSVEG YKNIVNAIPD PVFAVDDDYN
ILLANNAVAR LAGKTDGEQV RGMRCSSIFN TSVCGTDRCP ICQARTKQGR YEAEIIELNI
HGKSRWIRPY GDILHDCHGQ RAGYLEVASD VTELYRKETE LKGHMSRMQA VNTEVVEVAS
QVAEASASIE EQTRQVLSSA DSQRHLIAES VGAIGQMNDT IMEVARSAAL ASQQAGSGQT
KAQEGSRIVS DAVQAIGTVS QLSGVLRTNL TELGGQAESI GQIMNVISDI ADQTNLLALN
AAIEAARAGE AGRGFAVVAD EVRKLAEKTM NATQEVRRSI ETIQSGAARN ISSMEEVASA
VGQATVLAER SGTALREIVA LVNDTSSQVT AIATAAEEQS ASSEEIKRSV EQVSALSEET
AQRMEDAARA VNDLTGLAQR LGHLSRS