Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_2020 |
Symbol | |
ID | 4662728 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 2350366 |
End bp | 2351106 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639820263 |
Product | ABC transporter related |
Protein accession | YP_967463 |
Protein GI | 120603063 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1126] ABC-type polar amino acid transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.55147 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCATCA TTTCCGCTCG CAACGTCAAC AAGTACTTCT ACGTTCCCGA AGAGCTGCAC GCCCTGCGCG ACGTCTCGCT CGACGTGGCA CCGGGCGAGG TCGTGGTCAT CATCGGGCCT TCCGGGTCGG GCAAGAGCAC CTTCCTGCGC TGCCTGAACA GGCTCGAGTA TGCCGATTCG GGAGAGATTC TCATTGAGGG GCGCGACATT CTCGACCCCA AGTGCGAAAT CAACGAGGTG CGCGCCGAGG TCGGCATGGT CTTCCAGTCC TTCAACCTCT TCCCGCATCT CTCGGTGCTG GAGAACGTGG CACTGGCGCA GATGACCGTG CGCAAGCGTT CGCGTGCCGA GTCCGAGAAG AAGGGCATGG AACTGCTCAC CAAAGTGGGC ATCGCCGACA AGCATGCCGT CTATCCCGAC CAGCTTTCGG GTGGGCAGCA GCAGCGTGTG GCCATTGCAC GTTCTCTCGC CATGGACCCC AAGATCATGC TCTTCGACGA ACCCACCTCG GCGCTGGACC CCGAGATGGT CGGCGAAGTG CTCGACGTCA TGCGCAACCT CGCGCGTGAG GGCATGACCA TGGTCGTGGT CACGCACGAG ATGGGCTTTG CCCGTGAAGT GGCCGACCGT GTGGTCTTCA TGGACCATGG GGCCATTCTC GAAATAGCGA CGCCCAAGGA CCTGTTCACT ACCGGCGCCA CACACGATCG TACGAAACTG TTCCTGAGCC AGATACTCTA G
|
Protein sequence | MTIISARNVN KYFYVPEELH ALRDVSLDVA PGEVVVIIGP SGSGKSTFLR CLNRLEYADS GEILIEGRDI LDPKCEINEV RAEVGMVFQS FNLFPHLSVL ENVALAQMTV RKRSRAESEK KGMELLTKVG IADKHAVYPD QLSGGQQQRV AIARSLAMDP KIMLFDEPTS ALDPEMVGEV LDVMRNLARE GMTMVVVTHE MGFAREVADR VVFMDHGAIL EIATPKDLFT TGATHDRTKL FLSQIL
|
| |