Gene Dvul_2015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2015 
Symbol 
ID4662855 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2345883 
End bp2346746 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content62% 
IMG OID639820258 
Product4-hydroxybenzoate polyprenyltransferase, putative 
Protein accessionYP_967458 
Protein GI120603058 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0382] 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases 
TIGRFAM ID[TIGR01475] putative 4-hydroxybenzoate polyprenyltransferase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0915857 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGT TCGGCAGCTT CGCGGCCATA TGCCGCATGA TAAAGATCGA GCACTCCATC 
TTCGCCCTTC CGTTCGCCTT TGCCGGAGCG TTCATCGCCA GCGGCGGCGT ACCGGCGTGG
AAGCCCTTCG TGCTGCTCAC CATCGCCATG GTCGCAGTCA GGTCGTTCGC CATGGCGTTC
AACAGGGTCG TCGACCTGCC ATTCGACCGC CGCAATCCCC GTACGCAGAA CAGGCCGCTT
GTCACGGGTG AGATAACGCG GTTGCAGACG TGGGCCTTCA TTGTCGTCAT GGCGGTGGTC
TTCGTGCTTG CCTGTGCCGG TCTGAACAGA CTCTGTCTCA TGCTGTCGCC GCTGGCGCTC
GGCATCTCGG CCCTCTACAG CGTCATGAAG CGCTTCACGT GGCTGTGTCA CTTCGTGCTT
GGGGCGGTTC TGGGACTCGC GCCGCTGGCG GGGTGGTTGA GCGTCGACCC CGTGTTCACG
CTGCCTGCGG TGCTGCTGTT CTGGGGCGTG CTCTTCTGGG TGGCGGGTTT CGACATCCTC
TATTCCTGTC AGGATACAGC CTTCGACATC GAGGTGGGGC TGCATTCCGT ACCTGCCCGT
TTCGGCATAC CCACCGCACT GGTCATCTCC ACGTTCTGCC ATGTGAATAC GGTCGTCTTC
TTCCTGCTTG CGGGCTGGGC GGCAGGTCTC TCATGGGCGT GGTATCCGGT CTGGGCCATC
GTCTCGCTGG TGCTGGTGCT TGAACACAGA CTGATCAGGG CCGACGACCT GTCGCGTGTG
AACATGGCGT TCTTCACGCT CAACGGGGTC GTCTCCATCG TGGTGTTCGC CGGCATCGTA
ACCGGGATCT TTATCGGACG TTGA
 
Protein sequence
MTPFGSFAAI CRMIKIEHSI FALPFAFAGA FIASGGVPAW KPFVLLTIAM VAVRSFAMAF 
NRVVDLPFDR RNPRTQNRPL VTGEITRLQT WAFIVVMAVV FVLACAGLNR LCLMLSPLAL
GISALYSVMK RFTWLCHFVL GAVLGLAPLA GWLSVDPVFT LPAVLLFWGV LFWVAGFDIL
YSCQDTAFDI EVGLHSVPAR FGIPTALVIS TFCHVNTVVF FLLAGWAAGL SWAWYPVWAI
VSLVLVLEHR LIRADDLSRV NMAFFTLNGV VSIVVFAGIV TGIFIGR