Gene Dvul_2010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_2010 
Symbol 
ID4663325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2341987 
End bp2342841 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content63% 
IMG OID639820253 
ProductABC transporter, periplasmic substrate-binding protein, putative 
Protein accessionYP_967453 
Protein GI120603053 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2998] ABC-type tungstate transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.511781 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAGAA TAGCGACCTT GGTAGTGTTG TGCCTACTTG TGATGACGAC GTGTGCCCTG 
GCGGGGGATG CCCCCTGCAC CGAACGTTAT GGAAAGGGGG AACAGGCGTT GCGACTGGCG
ACAGGCAGTC CGGGAGAGTT GGGGCTGGTC GGTGCCCTGG GCGAGGCATG GAGTGCCCGT
AGCGGCATGG CCCTGTGCTG GCGCAAGGCG GGAACGGGTG ATGCCCTGGC CGCGCTCAAG
GCCGGAGAGG TGGACATGGT GATGGTGCAC GGCCCCAAGG CCGAGAAGAA GGCCGTTGAG
GAAGGCTGGG CCACGGGGCG TGCCCTTGTG GGTTCCAACG AATTCTTCAT CGTCGGCCCG
GTCGCAGACC CCGCAGGCAT CGCCAAGGCG ACGGACGCGG CAGATGCCTA CCGTCGCATC
GCCAAGGCGG GGGCCCTTTT CTTCTCGCGT GGTGACAACT CCGGGACGCA CAAGAAGGAA
CTGGATATCT GGGCATCTGC CGGTATCACA CCCTCCGGGG CATGGTACAC CGTGCACAAG
GGCTTCATGT CGGCTACGCT GCAACGGGCC GATGCCGAGG GCGGCTACTT CATGACCGAT
TCCAGCACAT GGGTTGCTGA AAAGGGCAAG CTGAGGCGCC TTGCCGTGTT GTTCAGGGGT
GACCCGGTGC TCATCAATGT CTATCACGCA CTCCTAAGGG CCGAAGGCGG CAAGGCCGCA
GTGCCCGCCG CCGTCGATTT CGCGGCGTTC GTGACGTCGC CCGAAGGGCA GGACATCGTG
GGCTCTTTCG GTCGCAAGGA ATACGGCGAA GGACTTTATA ACGACGCGGC CTACGCGAAG
AAGTACGATC ATTGA
 
Protein sequence
MQRIATLVVL CLLVMTTCAL AGDAPCTERY GKGEQALRLA TGSPGELGLV GALGEAWSAR 
SGMALCWRKA GTGDALAALK AGEVDMVMVH GPKAEKKAVE EGWATGRALV GSNEFFIVGP
VADPAGIAKA TDAADAYRRI AKAGALFFSR GDNSGTHKKE LDIWASAGIT PSGAWYTVHK
GFMSATLQRA DAEGGYFMTD SSTWVAEKGK LRRLAVLFRG DPVLINVYHA LLRAEGGKAA
VPAAVDFAAF VTSPEGQDIV GSFGRKEYGE GLYNDAAYAK KYDH