| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_2004 |
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| Symbol | |
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| ID | 4662869 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 2334691 |
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| End bp | 2336121 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639820247 |
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| Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
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| Protein accession | YP_967447 |
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| Protein GI | 120603047 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0621] 2-methylthioadenine synthetase |
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| TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family
[TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.460687 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.201882 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACGGC CAGACAGGCA CCGCAGCACA GTCCCCCGCA ACACACTCCG CGCCAGCGCG
CAAGCCGACA CGATACCCCC CATGCACGAC CGCACATTCC ACATAGAGAC GTTCGGCTGC
CAGATGAACG TCAACGACTC GGACTGGCTC GCCCGCGCCC TCATGGAGCG CGGCTTCTCA
CCCGCCCCCT TCGGTGAGGC GAGACTGACC ATCGTCAACA CCTGTTCCGT ACGCGACAAG
CCCGAACAGA AGGTCTACAG CCTGTTGGGC CGCATCAGGC AAGCCACCGG CAAGAAACCC
GACGCCTTCG TCGCGGTGGG CGGTTGCGTT GCACAGCAGA TAGGTTCGGG CTTTTTCAGC
CGCTTCCCGC AAGTGCGGCT CGTCTTCGGC ACCGACGGAC TCGCCATGGC CCCGCAAGCC
CTCGACCGCC TTGTCGAGGA ACCCGACCTC AAACTCTCGC TGCTCGACTT TTCCGAGGAC
TACCCGGAAC GCGACGCAGT CCTCGGGCAG GGGGCCGTGC CCGCGTCGGT CTTCGTCAAT
ATCATGCAGG GGTGCGACAA CTTCTGCGCC TACTGCATCG TGCCCTACAC ACGCGGCAGG
CAGAAGTCGC GCGCCACAGG CACCATCCTT GACGAATGCC GCGCCCTTCT CGACAGGGGC
GCGAGAGAGA TAACCCTGCT GGGCCAGAAC GTGAACTCGT TCGGGCAGGA TAGCCACGGC
GACGGTACCA CGTTCGCGCA ACTGTTGCAC AAGGTCGCCG CACTGCCGGG GCTGGAGCGC
CTGCGCTTCG TCACCCCGCA CCCCAAGGAC ATCGCCCCCG AGGTGGTCGA AGCCTTCGGC
ACGCTGCCCA ACCTGTGCCC CCGGCTGCAT CTGCCACTAC AGGCAGGGTC GGACCGCATC
CTCAAGCTCA TGGGACGGCG CTACGACATG GCACGGTACC TGCGCATCGT GGACGACCTG
CGTGCCGCAC GACCCGACAT CGTGCTCTCC AGCGACATCA TCGTGGGCTT CCCCGGTGAG
ACGGAAGAGG ACTTCATGGA GACCATGGGC GCACTCGAGA CGGTGGGCTA CGCCGCCTCG
TACTCGTTCT GCTACTCCGA CAGGCCCGGC ACACGCGCCG AGATGCTGCC CGACAAGCTG
TCCCGCGAGG TCAAACTCGA ACGGCTCGAA CGGTTGCAGA CACTTCAGAA CAGATTGACG
GAACGATGCC TGCAAGACAT GGTAGGAAAG AAGGTCGAGG TACTCCTCGA AGGGATGAGC
CGCAAACCGG GCGACGAAGG CGACAGCTGG CAGGGCCGCG ACCCCTACGG AAACCTGGTC
AACGTCGCGC TGCCGCAAGG GTCGGACGTG CGTGGAAGGT TCTTGCCCGT CGTCGTCGCG
CAGGCCAAGA AGCATTCGCT CCTCGCGGAG CAGGCAGGTG CGCCATGGTA G
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| Protein sequence | MPRPDRHRST VPRNTLRASA QADTIPPMHD RTFHIETFGC QMNVNDSDWL ARALMERGFS
PAPFGEARLT IVNTCSVRDK PEQKVYSLLG RIRQATGKKP DAFVAVGGCV AQQIGSGFFS
RFPQVRLVFG TDGLAMAPQA LDRLVEEPDL KLSLLDFSED YPERDAVLGQ GAVPASVFVN
IMQGCDNFCA YCIVPYTRGR QKSRATGTIL DECRALLDRG AREITLLGQN VNSFGQDSHG
DGTTFAQLLH KVAALPGLER LRFVTPHPKD IAPEVVEAFG TLPNLCPRLH LPLQAGSDRI
LKLMGRRYDM ARYLRIVDDL RAARPDIVLS SDIIVGFPGE TEEDFMETMG ALETVGYAAS
YSFCYSDRPG TRAEMLPDKL SREVKLERLE RLQTLQNRLT ERCLQDMVGK KVEVLLEGMS
RKPGDEGDSW QGRDPYGNLV NVALPQGSDV RGRFLPVVVA QAKKHSLLAE QAGAPW
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