Gene Dvul_1999 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1999 
Symbol 
ID4663148 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2331193 
End bp2332050 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content67% 
IMG OID639820242 
Productendonuclease III 
Protein accessionYP_967442 
Protein GI120603042 
COG category[L] Replication, recombination and repair 
COG ID[COG0177] Predicted EndoIII-related endonuclease 
TIGRFAM ID[TIGR01083] endonuclease III 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.71433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.505258 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTGC CTTCCGTACA GCAACGCGCG TTGCAGGTGC TCGACCTCTT GCGCAGACGC 
TATCCGACCC CGGCCACGCA TCTTGTGGCC CGCAATCCCT GGGAACTGCT GGTTGCGACC
GTGCTTGCAG CCCAGTGCAC CGACGAACGT GTGAACAAGG TCACCCCGCA CCTGTTCGCC
CTGTGGCCCG ACCCCGCCGC GCTGGCATGT GCCACGCAGG AGGCGCTTGA GGAGGTCATC
CATTCCACGG GGTTCTATCG TAACAAGGCG AAGAACCTGC TGGGGGCGGC CCGGCGTGTC
ACCGAGGTGC ACGGGGGCGA GGTGCCGCGA ACCATGGATG AACTGGTGCA GTTGCCCGGT
GTGGCACGCA AGACCGCCAA TGTCGTGCTC TGGGGGGGCT TCGGCGTCAA CGAGGGCATC
GCCGTCGACA CGCATGTGAA GCGCATCGTG CACCGTATGG GGCTCACGAA GGAGACCGAC
CCGGTGGCGG TCGAACGTGA CCTGATGCGT CTCTACCCGC GCGAAGCGTG GGGTGACGTC
AACCACATGC TGGTGTGGTT CGGGCGTCAT GTGTGCGACG CACGAAAGCC CTTGTGCGAA
CAGTGCGAGA TGGCTGGTAT CTGCGCGAAG GTCGGCGTGG GCAAGGAGGA TGCGCCCGCC
GCCCCCCGGA AGGGGCGCAA GCCCGGTGCC GTGGCGGCGA AGTCCGGGCG TTCCGGTACC
AGGGGGCGCA AGACGGCATC GACGAAGGAC GCAGGAGAGG ATGTTGCGCA GGAGGCAGCA
TCCGCCGGGC AGGCGCACGA GACCGGGACG AAGCCGGTGC GCGGGCGTCG CGGCAAGTCC
GGTGGAGGCG ACGCATGA
 
Protein sequence
MPLPSVQQRA LQVLDLLRRR YPTPATHLVA RNPWELLVAT VLAAQCTDER VNKVTPHLFA 
LWPDPAALAC ATQEALEEVI HSTGFYRNKA KNLLGAARRV TEVHGGEVPR TMDELVQLPG
VARKTANVVL WGGFGVNEGI AVDTHVKRIV HRMGLTKETD PVAVERDLMR LYPREAWGDV
NHMLVWFGRH VCDARKPLCE QCEMAGICAK VGVGKEDAPA APRKGRKPGA VAAKSGRSGT
RGRKTASTKD AGEDVAQEAA SAGQAHETGT KPVRGRRGKS GGGDA