Gene Dvul_1998 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1998 
Symbol 
ID4663248 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2330378 
End bp2331196 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content64% 
IMG OID639820241 
Producthypothetical protein 
Protein accessionYP_967441 
Protein GI120603041 
COG category[L] Replication, recombination and repair 
COG ID[COG3359] Predicted exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.343248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.497208 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACGCT CGACGTTCAG GCATCTGCCC GGCGTAGGGC CGGGAAAGGA GGCCCGCCTC 
TGGCAGGAGG GCTGCCTCAC GTGGGACGAC GCGCTTGCGC GGGGACGCCT GTCATGCCGT
GGCGGGGGCG GGGCAGCTGC ACACCTCGAA GAGTCGAAGG CACGCCACGA GGCCGGGGAT
GCGCAATGGT TCGGCGAACG TCTGGCCCCT GCGGAACAAT GGCGGCTCTT CTCTGCCTAC
CGGCATAGCG TTGCCTATGT GGACATCGAG ACCACGGGCA TGGCGTGGCC GATGGCGCAC
ATCACATCCA TCGCCCTCTA CGACGGTGTC ACCGTGCGTA CCTATGTGCA TGGTGAGAAC
CTTGAGGCGT TCGCCGACGA CATCCTGCCC TACCGCCTGC TGGTCACCTT CAACGGGCGT
TCCTTCGATG CCCCGTTCAT CGAACGGTCG TTCGGCATCC GGCTACGGAT GGCCCACCTC
GACCTTCGGC CCGTGCTGCG GGCTGCGGGC TATACCGGCG GACTCAAGCG CATCGAGCAT
TCGCTGGGCA TGGGGCGCGG CGACCTTGAA GGCGTGGACG GTTTCACCGC CGTGTTGCTC
TGGCAACACT ACGAGCGTAC CGGGGACGTG CGGGCCCTAG AGACACTGCT CGCTTATAAT
GTGGAAGACG TTCTTTCGCT GGAACAGCTG GCGGTCTTTG CGTACAATAG ACATCTGGCG
GAGTTGCCCC CCCTGCCGGT CGCTACGCTG CCGCAGTGCG GGTGCGCACA CAATCCGTGG
AACGCACATC CCGAAGTGCT TGCCCGTCTG ACGAGATGA
 
Protein sequence
MIRSTFRHLP GVGPGKEARL WQEGCLTWDD ALARGRLSCR GGGGAAAHLE ESKARHEAGD 
AQWFGERLAP AEQWRLFSAY RHSVAYVDIE TTGMAWPMAH ITSIALYDGV TVRTYVHGEN
LEAFADDILP YRLLVTFNGR SFDAPFIERS FGIRLRMAHL DLRPVLRAAG YTGGLKRIEH
SLGMGRGDLE GVDGFTAVLL WQHYERTGDV RALETLLAYN VEDVLSLEQL AVFAYNRHLA
ELPPLPVATL PQCGCAHNPW NAHPEVLARL TR