Gene Dvul_1967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1967 
Symbol 
ID4663602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2284930 
End bp2286189 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content65% 
IMG OID639820208 
Producturacil-xanthine permease 
Protein accessionYP_967410 
Protein GI120603010 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG2233] Xanthine/uracil permeases 
TIGRFAM ID[TIGR00801] uracil-xanthine permease 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.522211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACAG ACCCGCGTTT CATACCGGAG TACAATTTCA GGTTTCGTGA CGGGCTGATA 
GGGGCCCAGA TGCTCTTCGT GGCCTTCGGC GCACTGGTTC TCGTGCCGCT GCTTACAGGC
CTCGACCCCA ACGTGGCCCT GTTCGCGGCA GGGTGCGCCA CGCTCATCTT CCAGACCATC
ACGCGGGGCA AGGTGCCCAT CTTCCTTGCA TCGTCGTTCG CCTTCATCGC GCCCATCATC
TACGGCGTGC AGACCTGGGG CATCCCGGGT ACCCTCTGCG GTCTCACCGC CGCGGGTCTG
GTGTACATGG CGCTCAGCGC CCTCATCCGC GTGCAGGGGC CCGGCGTGGT CGAGCGTGTG
CTGCCCCCCA TCGTCACGGG GCCCGTCATC ATGGTCATCG GCCTCATCCT GTCTCCCGTG
GCCGTCTTCA TGGCCATCGG CAAGACGGGT GACGGCGCGG TGCAACTCAT CCCCAAGGAC
AAGGCCATGA TCGTGGCCAT GGTGTCGCTG GCATCCACGG TCATCGCATC CCTGCTTGGG
CGTGGTTTCG TCAAGCTCAT TCCCATCTTC TGCGGCATCG TGGCCGGTTA CGCCACGTCG
CTCTTCTTCG GCATCGTCGA CTTCACCCCG GTGCTCAAGG CCCCGTGGTT CGCCGTGCCC
AATTTCGTCA CGCCCGAATG GAACCTCGAC GCCATCCTGT TCATCGTGCC CGTGGCCATC
GCCCCGGCCA TCGAACATGT GGGCGGCATC CTTGCCATCG GGTCCGTCAC CGGCAAGAAC
TACCTCGAAG ACCCGGGTAT CGACCGTACC CTTTTCGCCG ACTCCATCGC CACCATGGTG
GCTACATCCG TGGGCGGGCC GCCCTGTACC ACCTACGCCG AGGTCACCGG GGCCATCGCG
CTCACCCGCG CCTTCAACCC CGCCATCCTC ACATGGGCAG CCATCACCGC CGTCTGCCTC
GCCTTCGTGG GCAAGCTTGG CGCATTGCTG ACCACCATCC CCTCGCCTGT CATGGGCGGC
ATCATGGTGT TGCTCTTCGG TGCCATCACC GTTGTGGGCA TGAACAGCCT CGTGCGCGCA
GGGCAGGACC TCATGGTGCC CCGCAACATG GCTGTCGTCG CCATCATCCT CGTGTTCGGT
CTCGGCGGCA TGGCCTTCAA CGTGGGCGAA TTCTCGCTTC AGGGCATCGG CCTCGCCGGT
ATCACCGGAG TGCTTCTCAA CCTCGTGCTT CCGGGCAGAC GCGCCGCTTC CGGCAGGTAG
 
Protein sequence
MTTDPRFIPE YNFRFRDGLI GAQMLFVAFG ALVLVPLLTG LDPNVALFAA GCATLIFQTI 
TRGKVPIFLA SSFAFIAPII YGVQTWGIPG TLCGLTAAGL VYMALSALIR VQGPGVVERV
LPPIVTGPVI MVIGLILSPV AVFMAIGKTG DGAVQLIPKD KAMIVAMVSL ASTVIASLLG
RGFVKLIPIF CGIVAGYATS LFFGIVDFTP VLKAPWFAVP NFVTPEWNLD AILFIVPVAI
APAIEHVGGI LAIGSVTGKN YLEDPGIDRT LFADSIATMV ATSVGGPPCT TYAEVTGAIA
LTRAFNPAIL TWAAITAVCL AFVGKLGALL TTIPSPVMGG IMVLLFGAIT VVGMNSLVRA
GQDLMVPRNM AVVAIILVFG LGGMAFNVGE FSLQGIGLAG ITGVLLNLVL PGRRAASGR