Gene Dvul_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1946 
Symbol 
ID4664028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2266338 
End bp2267012 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID639820187 
Productcytochrome c assembly protein 
Protein accessionYP_967389 
Protein GI120602989 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.446735 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.890252 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAACA ACTGGCTCGC TCCCCTAGCC CTCGCCGCCG GTGCGGGGTT GGCCGTGTGC 
CAATACCTGA TCTACGTGTA CGCCCCCGTC GAATCCATGA TGGGCCTCGT GCAGAAGATC
TTCTACACCC ACCTGCCGCT GGCATGGTGG TCGTTCGTGA GCTTCTTCAC GGTGTTCATC
GCCAGCATCG CCTTTCTGCG TACGCGCGAC AGGCGCTGGG ACAGCCTCGC CGGTGCCGCC
GCCGAGGTGG GCGTGCTGTG CAGCGGACTT GCGCTGGTCA CGGGTTCCAT CTGGGGACGA
CATTCATGGG GCGTATGGTG GACATGGGAC CCGCGTCTCA CCACCACGCT CGTCATGTGG
TTCGTCTACG CCGGATACCT CGTCCTGCGT TCCATGAACC TCTCCCGCGA CAGGCAGGCC
ACGGTCTCCG CCGTCGTGGG TATTGCCGCC TTCGTCGACG TGCCGCTGGT CTTTCTCTCG
GCGCGTCTGT GGCGCTCGAT ACACCCCGCC GTCTTCGCCT CGCGCGATGG CGGCCTCGAA
CCGGAAATGA AACTCACCGC CGTCGTCTGC GTCGCCGTCT TCGGCCTCAT GTGGGCAGCA
CTCACCGGAG TGCGCTACAT GCAGACCCGC CAGACAGACA GGCTCGACAC CCTTGCCACG
CGCGAGGCAC TCTAG
 
Protein sequence
MRNNWLAPLA LAAGAGLAVC QYLIYVYAPV ESMMGLVQKI FYTHLPLAWW SFVSFFTVFI 
ASIAFLRTRD RRWDSLAGAA AEVGVLCSGL ALVTGSIWGR HSWGVWWTWD PRLTTTLVMW
FVYAGYLVLR SMNLSRDRQA TVSAVVGIAA FVDVPLVFLS ARLWRSIHPA VFASRDGGLE
PEMKLTAVVC VAVFGLMWAA LTGVRYMQTR QTDRLDTLAT REAL