Gene Dvul_1940 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1940 
Symbol 
ID4664244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2260563 
End bp2261201 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content66% 
IMG OID639820181 
Producthistidinol-phosphate phosphatase family protein 
Protein accessionYP_967383 
Protein GI120602983 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0241] Histidinol phosphatase and related phosphatases 
TIGRFAM ID[TIGR00213] D,D-heptose 1,7-bisphosphate phosphatase
[TIGR01656] histidinol-phosphate phosphatase family domain
[TIGR01662] HAD-superfamily hydrolase, subfamily IIIA 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.339394 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATTGC GAAATCTGCT GCTGGACAGG GACGGCACGG TCATCGAAGA CCGCCATTAC 
CTGTCCGACC CGGAGGGTGT GACCCTGCTG CCCGGAGTCG GCCCTGCCCT CGGTCGTCTT
TCGCGGGCAG GTCTCCGGCT GTTCCTCGTC ACCAACCAGT CGGGAATCGG CCGGGGATAC
TTCACTGTCC CGGACTATGA GGCGTGTCAG GCCCGACTCG CAGCCTTGCT TGCCCCATAC
GGGGTGACGT TCGTGGATGT GGCCTGCTGC CCCCATGCCC CCGATGAGGA ATGCTCGTGC
CGCAAACCGG GTACGGGCAT GTGGGATATG CTGCAGAACC GCCACGGCCT TGTCGCTGGC
GAGACGGCGA TGGTGGGGGA TAAACTGGAT GATGTGCTCT TTGCGCGTAA CGCCGGACTC
GCCGCAGCCA TACTCGTGCT CACGGGCAAG GGGGCGAGGG CGGCAGGGAG TATCGGCCTT
TCCGTGCCTG CCGGGGGCAC GTGCCTTGAT GTGGCCCCCT CCGGGGGCGA TGCCTCTGGA
CGGCCCGATG TGGTGGCGTG CGACCTCGTT GCCGCGGCCG ACTGGCTTCT GGCCGTCAGT
GCCCGGCGTA GTGCGCCGTC TCTGGAGGAA CTTTGCTGA
 
Protein sequence
MALRNLLLDR DGTVIEDRHY LSDPEGVTLL PGVGPALGRL SRAGLRLFLV TNQSGIGRGY 
FTVPDYEACQ ARLAALLAPY GVTFVDVACC PHAPDEECSC RKPGTGMWDM LQNRHGLVAG
ETAMVGDKLD DVLFARNAGL AAAILVLTGK GARAAGSIGL SVPAGGTCLD VAPSGGDASG
RPDVVACDLV AAADWLLAVS ARRSAPSLEE LC