Gene Dvul_1939 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1939 
Symbol 
ID4664258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2259292 
End bp2260326 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content66% 
IMG OID639820180 
Productglycosyl transferase family protein 
Protein accessionYP_967382 
Protein GI120602982 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0859] ADP-heptose:LPS heptosyltransferase 
TIGRFAM ID[TIGR02195] lipopolysaccharide heptosyltransferase II 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.21219 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGTCGTA TCGGCGTCTG GAACACCGCC TTTCTGGGCG ACGCAGTGTT GACCTTGCCC 
CTGTTGCAGA CCTTGCACCG CCGCTTTCCT GATGCGGAAA TCCATTTCTG GGTGCGCAAG
GGGGTGGGGG CCTTGTTCAC CGCCGTGCCA TGCCTCGCCG CTGTCCATGA ATTCGACAAG
CGCGGCACAC AGGGCGGTGG CGGTGCCGTG TTCGGACTAG GCCGGGCGCT GGCGCGTCAG
GGCTTCGACA TCTGGGTGAA CGCCCACACC AGCCTGCGAA GCGGTCTTGT GGCGCGGGCC
ACAGGGGCAC CTGTGCGTAT CGGCTACGAC AGGCCGTGGT ACAATCGCCT GTTGCATACG
CACGTGGTAG ACCGCAGGTT CGACGAACTG GACGAGATAG AACGGCTGCT GCAACTGGTC
GGCCCTCTTG CCATCGAAGA CCGGGAGACA TGGCCTGAAC TCGTTCTGCC AGCCGTTGCC
CGTGAACGGG CAGAAGCCTA CTGGCAGCGG TATGTGCGGG GCCCTGTCCT TGGAATGCAC
CCCGGTTCGG TATGGGCCAC CAAACGCTGG ACGGCGGCGC ACTTCGCCGA GGTCGCCCGT
CGTGCCGCCG CAGAAGGGGC GCAGGTGATG CTCTTCGCCG GGCCCGGTGA AGAGACGGTG
GCACGGTCCG TGGTCGCGAT GGCGGGGCTG GAGGGTTCTC CGGCGTTGCT CGACATGGCG
GGAGCCCTGT CGCTTGTCGA CCTTGCGGCA TGGCTTGGCA GACTCGACTG TTATCTCAGC
AACGACTCAG GCCCCATGCA CATCGCGTGG GCGCAGCGTA CGCCCGTGAC CGCTGTCTTC
GGTCCCACCG TGCGCCGACT GGGCTTCTAT CCGCGTGGCG AGGGCACAAC AGTATTCGAA
GTCGACCTCG ACTGCCGCCC CTGCGGGTTG CACGGGCCGC AGCAATGCCC TCTGGGCCAT
CATCGCTGCA TGACCGACGT CACTCCCGAC ATGGTGTGGC CCGACATCCG GCGCAAGCTC
TTCGGTCAGT CCTAG
 
Protein sequence
MRRIGVWNTA FLGDAVLTLP LLQTLHRRFP DAEIHFWVRK GVGALFTAVP CLAAVHEFDK 
RGTQGGGGAV FGLGRALARQ GFDIWVNAHT SLRSGLVARA TGAPVRIGYD RPWYNRLLHT
HVVDRRFDEL DEIERLLQLV GPLAIEDRET WPELVLPAVA RERAEAYWQR YVRGPVLGMH
PGSVWATKRW TAAHFAEVAR RAAAEGAQVM LFAGPGEETV ARSVVAMAGL EGSPALLDMA
GALSLVDLAA WLGRLDCYLS NDSGPMHIAW AQRTPVTAVF GPTVRRLGFY PRGEGTTVFE
VDLDCRPCGL HGPQQCPLGH HRCMTDVTPD MVWPDIRRKL FGQS