Gene Dvul_1938 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1938 
Symbol 
ID4664274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2257976 
End bp2258797 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content64% 
IMG OID639820179 
ProductABC transporter related 
Protein accessionYP_967381 
Protein GI120602981 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1122] ABC-type cobalt transport system, ATPase component 
TIGRFAM ID[TIGR01166] cobalt transport protein ATP-binding subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0572135 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACA CGACCGGGAC TCCCCTTCTC TCTCTCGACG ACATCCACTT CACCTATCCC 
GGCACGACCG CACCTGTGCT GCGAGGTGCC ACCCTGCACC TCGCGCAGGG CGACAGGCTT
GGCCTTCTGG GGCACAACGG CAGCGGCAAG ACCACGCTGC TGCATATCGC CATGGGATTG
CTACGGCCCG AGTCGGGCAC GGTACACCAC AGGAACGCCG TGGCGCACGA CGAGGCGTCG
CTTGCCGCGT TGCGCCGCGA CATCGGATTC CTCTTCCAGA ATGCCGACGA CCAGTTGTTC
TGCCCCACCG TGCTTGAAGA TGTGGCCTTC GGGCCGCTCA ATCTGGGGCT GTCTCCGGAA
CAGGCGCGCG AACGTGCCAC GCAGACACTA CAAGGACTCG GGCTTGAGGG GTTCGGTGCA
CGGGTGACGC ATCGACTCTC CGGCGGAGAG AAGAAGATGG TGGCACTGGC GTCGGTGCTG
TCCATGCAGC CCACGGCGCT GCTTCTCGAC GAACCCACCA ACGACCTCGA CCCTGCCACC
CGCCAACGCC TCATCGACGT CCTTAACAGG ATGAGTGCAA CGCACATCAT CATCTCGCAC
GACTGGGACT TCCTCGCCCG CACCTGCACG ACCTTTCTCA CCGTCGACGA CGGTATCGTG
CGCACATCAA GGCACACCCC TCACGTGCAC ACCCACATCC ACCACGGTGG GGAGGTCGCA
CACGAGCATC CGTCGCGCGG ATGTTGCCAT CAGCATGACG GCAGCCATCA TCACGCCGGG
CATGATGACG ACCACCCCCA TACCAGCCAG ACGACCGAAT AG
 
Protein sequence
MTDTTGTPLL SLDDIHFTYP GTTAPVLRGA TLHLAQGDRL GLLGHNGSGK TTLLHIAMGL 
LRPESGTVHH RNAVAHDEAS LAALRRDIGF LFQNADDQLF CPTVLEDVAF GPLNLGLSPE
QARERATQTL QGLGLEGFGA RVTHRLSGGE KKMVALASVL SMQPTALLLD EPTNDLDPAT
RQRLIDVLNR MSATHIIISH DWDFLARTCT TFLTVDDGIV RTSRHTPHVH THIHHGGEVA
HEHPSRGCCH QHDGSHHHAG HDDDHPHTSQ TTE