Gene Dvul_1936 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1936 
Symbol 
ID4664278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2256592 
End bp2257206 
Gene Length615 bp 
Protein Length204 aa 
Translation table11 
GC content66% 
IMG OID639820177 
Productcobalt transport protein CbiM 
Protein accessionYP_967379 
Protein GI120602979 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0310] ABC-type Co2+ transport system, permease component 
TIGRFAM ID[TIGR00123] cobalamin biosynthesis protein CbiM 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.219318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACATCT CCGAAGGGGT TCTTCCCGCC TCCGTCCTGC TGGGCGGGGC AGCACTTACC 
GCAGCCGGCA CGGCCCTGGG GTTGCGGCGC ATCGACTGGG ACAGGGTGAT GACCGTGGCA
CTGCTCGCCG CCGCCTTTTT CGTCGCCTCT CTCATCCATG TGCCTGTCGG CCCTGTGAGC
GCCCATCTCG TCCTCAACGG GCTCATCGGC GTGATTCTCG GCTGGGCAGC CTTCCCCGCC
ATTCTCGTGG CCCTGCTGCT TCAGGCCCTT CTCTTCCAGT TCGGCGGTCT GCTGGTGCTT
GGCGTGAACA CCTTCAACAT GGCCCTGCCG CCTGTCATCT GCCACTATCT CTTCCGCAAG
GCGCTCACGG GCACCTCCAC GCCGCGCACG GGTGCGGCCT TCGCCTGCGG CTTCCTCTCC
GTGCTCCTTT CCGCATCGCT CACCGCCCTG TCCCTCGGTC TTGCCGGTGA GGGCTTCATC
CCGGCGGCGC AGTCGCTGCT CATCGCCCAT CTTCCCGTCA TGGTCGTCGA GGGCTGCATC
ACCGCCCTTG TCGTCGGGTT CCTCTACAAG GTTCGCCCCG AAGTGCTCGA CTTCTCGGCA
CAGGCGACCC GCTAG
 
Protein sequence
MHISEGVLPA SVLLGGAALT AAGTALGLRR IDWDRVMTVA LLAAAFFVAS LIHVPVGPVS 
AHLVLNGLIG VILGWAAFPA ILVALLLQAL LFQFGGLLVL GVNTFNMALP PVICHYLFRK
ALTGTSTPRT GAAFACGFLS VLLSASLTAL SLGLAGEGFI PAAQSLLIAH LPVMVVEGCI
TALVVGFLYK VRPEVLDFSA QATR