Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1929 |
Symbol | |
ID | 4664968 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 2246356 |
End bp | 2248245 |
Gene Length | 1890 bp |
Protein Length | 629 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639820170 |
Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
Protein accession | YP_967372 |
Protein GI | 120602972 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.292959 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0390357 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGACG TCATACGTGG GCACGCCCAG TCTTGGGGCG TCAAGGTCGC CTTCGGCCTC ATCATTGTCG TCTTCGTGTT CTGGGGCGTC GGCTCCATGC AGGAAGGCCC GACATCGGTC GTAGCCACGG TGAACAAGAA GCCCATCGTC ATTCGCGACT TCATTCGTGA GTATGAGCGT CAGGTCGAAT CGCTGCGTAC CCGGTTCCCG GGTGTGACCG CGGATGAGCT CAAGAAACTG GGGCTCAAGC GGCAGGTGCT ACAGCAGATG GTTGCCGAGA CGCTCATGCA GCAAGAGGCC GAACGCCTTG GCATAACCGT GACGCCGTAT GAGCTGCGTG CCGCCATCGA CCAGATTCCG GCCTTCCGCG ACGCGTCGGG CAAGTTCGAC CCCGAGACGT ACAAGAAGGT GCTCAAGGCA CAGCAGACCG TCCCCGGTCG TTTCGAGGAA GGGGTGCGCA AAGACATGCT GGGCCGCAAG ATGCGTGCGC TTGTCACCGC CGGTGCGGTC GTCACCGATG CCGAGGCGCG TGACATGTTC ACCTACGCGC AGGAAAAGCG CAGCATTGAC TACGTCCTCT TCCCGCTCGA CGAATACGCT GCGGCAGCCA GCATCGAAGA TGCCGCACTG CAGGCGTGGT ACGACAGCAA CAAGGCCCGG TTCACCGAAC CGCAGAAGGT GCGCCTCGAT TTCGTGCGCA TCTCGGCCGA GTCGCTTGCC GCTGGCATCG ACATCCCCGA AACGGCCATT GCGGCGTTCT ACGCCGAGAA CGCGGCGAGC TACTTCATGC AGCCCGAACG GGTGCGTGCC CGTCACATCC TCGTGCGTGT GCCTGAAGGT GCCGACGAGG CCACCGTACG GAAGGCCGAA GAGCGCATCG CAGACGCTGC GGCGCAGATC AAGGCCGGAA AGGACTTCGC CGCCGTGGCG GCCAAGGTCT CCGAGGACGG CAGCGCGCGC AACGGTGGCG AGCTTGGCTG GTTCGGTCGT GGCGAGATGG TGAAGCCCTT CGAGGACGCC GCGTTCGGTC TCAAGCCGGG CGAGGTCTCC GCGCCGGTGC GTTCGCAGTT CGGCTTCCAT CTCATCAAGT CCGAAGGGCA TGAGGCGCAG CGCCAGAAGG CCCTCGACGA GGTGCGCAAC GAGATACGCA AGCGTCTGGC CGAAGAGAAG GCCATCGAGA AGGTGCACGA CTCCCTCGAC AACGCGCTTG AACTGGTGAG CGCAGGCAAG TCGGTGGACG AGATCGCTGC ACAGCTGAAG CTGGAGCGTC AGACCTCCGA ACCGCTGACC CGCGAAAGCG CGTCCGCCAC GCTGGGGCTC AAGCCCGCCG ACGTCACGCT GGCCTTCTCC GCACCTGCGG GGACGGTCAT CGACACGCCC CTCGAGGCCG AAGGCGGTTA CATCATCGCC CGTGTCGCCG AGGTCGCCCC CGAGCGCATT CCCGGTTTCG ACGAGGTGCG TGACAAGGTC GTCGTCGCCG TGCGCGAAGA CGAAGGCGCC AGACTGGCGC TCAAGGCCGC GGACGAGGCG CTTGCCGGGG TCAGGGACGG GCAGTTGCCC GGTGCGCTGG CCTCGCGGGT GAAGACCTCG CCGCTCTTCG GGCGCGACGG CAACATCCCC GGTCTGGGTG TCGACCCCGC TCTTGCCGCC GCGGCGTTCT CCGCGGAGAA GGGCGTGTGG AGCGACAAGG CGCATGCGAC TCCGCAGGGC GTTGTCGTGC TGCGCGTGCA TGAGGTCGTG CGGCCCACCG ACGCACAGTG GCAGGCCGTG GCCTCCACCG TGAAGGAGAC CATCCTTGCC GCCAAGCGTG AAGAGATGTT CCGCGCCTTC CTCACCACTC TCCATGCGAA GGGCAAGGTC GAGGTGAAGG ACGCCTCGGT GCTCGAATAG
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Protein sequence | MLDVIRGHAQ SWGVKVAFGL IIVVFVFWGV GSMQEGPTSV VATVNKKPIV IRDFIREYER QVESLRTRFP GVTADELKKL GLKRQVLQQM VAETLMQQEA ERLGITVTPY ELRAAIDQIP AFRDASGKFD PETYKKVLKA QQTVPGRFEE GVRKDMLGRK MRALVTAGAV VTDAEARDMF TYAQEKRSID YVLFPLDEYA AAASIEDAAL QAWYDSNKAR FTEPQKVRLD FVRISAESLA AGIDIPETAI AAFYAENAAS YFMQPERVRA RHILVRVPEG ADEATVRKAE ERIADAAAQI KAGKDFAAVA AKVSEDGSAR NGGELGWFGR GEMVKPFEDA AFGLKPGEVS APVRSQFGFH LIKSEGHEAQ RQKALDEVRN EIRKRLAEEK AIEKVHDSLD NALELVSAGK SVDEIAAQLK LERQTSEPLT RESASATLGL KPADVTLAFS APAGTVIDTP LEAEGGYIIA RVAEVAPERI PGFDEVRDKV VVAVREDEGA RLALKAADEA LAGVRDGQLP GALASRVKTS PLFGRDGNIP GLGVDPALAA AAFSAEKGVW SDKAHATPQG VVVLRVHEVV RPTDAQWQAV ASTVKETILA AKREEMFRAF LTTLHAKGKV EVKDASVLE
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