| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1927 |
|---|
| Symbol | |
|---|
| ID | 4662112 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 2244229 |
|---|
| End bp | 2245377 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639820168 |
|---|
| Product | basic membrane lipoprotein |
|---|
| Protein accession | YP_967370 |
|---|
| Protein GI | 120602970 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.940408 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0318829 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCGCA TTATCGTTCT GCTTGCCGCC ATGCTTGTCC TTTCCGGGCT TGCCGGATGC
GGCGATGACA AGAAACCCGC ACAGGAGGCC CCCAAGCAGG AGGCTCCCAA GCAGGAGGCC
AAGGCCGAAC AGCCTGCGGC CAAGGCGGGT GAAGACAAGA AGCTCCAGAT CGGCCTCGTC
TACATCTCCC CCGTGGGAGA CGCCGGCTGG TCGTATTCCC ATGATCAGGG CCGCAAGGCG
CTTGAAGAGG CGGGTGGCGT CACCACGTCG TACGTCGAAT CCGTGCCCGA AGGTCCCGAC
TCCGAACGAG TCATCCTGAA CATGGCACGC AAGGGCTACG ACATCATCTT CACCACCAGC
TTCGGCTACA TGGACCCCAC CATCAAGGTG GCCAGCCAGT ACCCCGACAT CACCTTCCTG
CATTGCTCCG GCTACAAGAC CGCGCCCAAC GTCAGCAACT ATTTCGGGCG CATGTATCAG
GCCCGCTACC TGACCGGCAT GGTTGCCGGG GCCATGACCA AGAACAACAT CCTCGGCTAT
GTGGGCGCGT TCCCCATCCC CGAGGTCATC CGCGGCATCA ATGCCTTCAC GCTGGGCGCA
CGCGCCGTCA ATCCCAATGC GCAGGTGCGC GTGGTGTGGA CAAAGACGTG GTACGACCCT
GCGACCGAAA AGGAAGCCGC GAAGAGCCTG CTTGACGTCG GTGCCGACGT CATCGCCCAG
CATCAGGACT CTCCCGGCCC GCAAGAGGCC GCACAGGAAC GCGGCGTGTA CTCCGTCGGT
TACCATACCG ACATGAGCGC ATTCGCCCCC AAGGCCCACC TCACTTCCGC CGTCTGGAAC
TGGAAGGACT TCTATCTTGA TGTCGTGAAG CAGGTTCGTG CCGGCACGTG GAAGTCCGGT
TCGTACTGGC CCGGTATCGA GTCCGGGGTC GTCGACATCG CCCCCTACGG TGAGATGGTG
CCGCAGGACG TGCGTGCCCG TGTCGACGCC GCCAAGGCGG ACATCAAGTC CGGCAAGCTC
AAGGTGTTCA CCGGGCCGGT CAAGGACCAG AAGGGCGCAG TGCGCGTCGC CGAGGGCGCC
GTGCCCACCG ACCAGGACCT GCTTGGCATG ACCTGGTTCG TCGAAGGCGT CATCGGTACC
ACCGAGTAG
|
|---|
| Protein sequence | MRRIIVLLAA MLVLSGLAGC GDDKKPAQEA PKQEAPKQEA KAEQPAAKAG EDKKLQIGLV
YISPVGDAGW SYSHDQGRKA LEEAGGVTTS YVESVPEGPD SERVILNMAR KGYDIIFTTS
FGYMDPTIKV ASQYPDITFL HCSGYKTAPN VSNYFGRMYQ ARYLTGMVAG AMTKNNILGY
VGAFPIPEVI RGINAFTLGA RAVNPNAQVR VVWTKTWYDP ATEKEAAKSL LDVGADVIAQ
HQDSPGPQEA AQERGVYSVG YHTDMSAFAP KAHLTSAVWN WKDFYLDVVK QVRAGTWKSG
SYWPGIESGV VDIAPYGEMV PQDVRARVDA AKADIKSGKL KVFTGPVKDQ KGAVRVAEGA
VPTDQDLLGM TWFVEGVIGT TE
|
|---|
| |