Gene Dvul_1917 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1917 
Symbol 
ID4664135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2235193 
End bp2236797 
Gene Length1605 bp 
Protein Length534 aa 
Translation table11 
GC content62% 
IMG OID639820158 
Product60 kDa inner membrane insertion protein 
Protein accessionYP_967360 
Protein GI120602960 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0706] Preprotein translocase subunit YidC 
TIGRFAM ID[TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0379054 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.178209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA AGCGCGCCAT CATAGCCGTC GTTCTCAGCT TCATCGTCCT CGTAGGATGG 
GGCTATCTCT CGGAATACAT GGGCTGGACG CCCAAATCCG TTCCGGCGAC CGAACAGAAG
ACTGCTGCTT CCGCACCCGC ACCGTCAGTC GTGACCTCCG CACCGGAGGC CGTGACCCCC
GCCCCCGCCT TCTCGCCTTC CACCGGTCAT GAAGTGACCG TGACGACTCC CCTCTACAAG
GCCGTCCTTC ATTCCGGCGG CGGTGTGCTG CGCCAGTTCA TGCTGTCGCG CTACCACATG
GGCATCGACC GCGATGCCGC CCCGGTGAAT CTCATCGAAT CTTCCGCCAT CCGCGTGGCG
CCGCTGGGCC TTCTGGTCAA CGGGCAGCCC TCGTGGAATA CGGGGCAGTG GGCCTTTGAA
GGTGGTGACC TGAACCTTGC CGACGGGCAG ACGGGCACCT TGCGGTTTGT GGGGTCGGTG
GACGGGCTGC GCGTTGTGCG CGAGCTTGAA TTCCATGCCG ACAGCTATCT CGTCACCGAG
AAGCTGCACC TTGCGCCCGA GGGCGACGCC CCCCGCACCG CGCGCGTGGG ATTCACCCTT
GGCACCACCA GCCTCACCCC GGGTGAGAGC CAGTACAACC TGACCCGTGT GGCATGGTTC
GCAGACGGCA GCTTCAGCGA GAAGTCCAGC ACCGGCGATC TTGAAAAGGG CGTTCTCATC
GACGGTTCCA TCGACTGGGC CGGGGTGATG AGCAACTACT TCCTTGCCGC CGTGGCGCCC
AAGGACACCC GAGCCGTGCT CAAGGGCAAG CTCGAAGGCG GCGTGTACCG CGTTGCGGTC
GAACGCCCCG ACCAGATGGT CAACCCCGGC AACAGCGACG TCATCGTCTG CAACTACTGG
TTTGGCCCCA AAGAGCGCGA CCTCCTGAAC GCAGCGCCCA ACAATCTCGG CAAGGCCATC
GACCTTGGCT GGTTCGGCTT CATCGCCCGC CCGCTGGTGA CCCTGCTCGA CTTCTTCTAC
AAGTACGTGG GCAACTACGG CACCGCCATC ATCCTGCTCA CCATCCTCAT CAAGCTCGTG
TTCTGGCCGC TTTCGCACAA GAGCTACAAG TCCATGGAGC AGATGAAGAA GCTCCAGCCC
ATGCTCGCCA AGGTGCGTGA GAAGCATGCC GACGACCGCG AGAAGATGAA CGAGGAGATG
ATGCGCCTGT ACAAGACCTA CAAGGTCAAC CCCGCAGGCG GCTGTCTTCC CATGCTGGTG
CAGATTCCCG TGTTCTTCGG TCTGTATCAG GCCCTTCTCA ATGCCATTGA ATTGCGTCAT
GCCCCGTTCA TCGCCCATGT GCCCTTCACC GACATCGTGT GGCTTGCCGA CCTTTCTGCC
AAGGACCCGT TCTACGTCAC CCCGCTGGTG ATGGGGGCGA CCATGTTCCT CCAGCAGAAG
CTCACGCCTC CCGCGGGAGA CCCCACACAG GCCAAGGTGA TGATGTTCAT GCCGGTGGTG
TTCACCTTCC TGTTCCTGAA CTTCCCTTCG GGTCTTGTGG TCTACTGGCT GTGCAACAAC
GTCCTGTCCA TCGCCCAGCA GTGGTGGATT CTGCGCAAGG CCTGA
 
Protein sequence
MENKRAIIAV VLSFIVLVGW GYLSEYMGWT PKSVPATEQK TAASAPAPSV VTSAPEAVTP 
APAFSPSTGH EVTVTTPLYK AVLHSGGGVL RQFMLSRYHM GIDRDAAPVN LIESSAIRVA
PLGLLVNGQP SWNTGQWAFE GGDLNLADGQ TGTLRFVGSV DGLRVVRELE FHADSYLVTE
KLHLAPEGDA PRTARVGFTL GTTSLTPGES QYNLTRVAWF ADGSFSEKSS TGDLEKGVLI
DGSIDWAGVM SNYFLAAVAP KDTRAVLKGK LEGGVYRVAV ERPDQMVNPG NSDVIVCNYW
FGPKERDLLN AAPNNLGKAI DLGWFGFIAR PLVTLLDFFY KYVGNYGTAI ILLTILIKLV
FWPLSHKSYK SMEQMKKLQP MLAKVREKHA DDREKMNEEM MRLYKTYKVN PAGGCLPMLV
QIPVFFGLYQ ALLNAIELRH APFIAHVPFT DIVWLADLSA KDPFYVTPLV MGATMFLQQK
LTPPAGDPTQ AKVMMFMPVV FTFLFLNFPS GLVVYWLCNN VLSIAQQWWI LRKA