Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1917 |
Symbol | |
ID | 4664135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 2235193 |
End bp | 2236797 |
Gene Length | 1605 bp |
Protein Length | 534 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639820158 |
Product | 60 kDa inner membrane insertion protein |
Protein accession | YP_967360 |
Protein GI | 120602960 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0706] Preprotein translocase subunit YidC |
TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain [TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0379054 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.178209 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAAAACA AGCGCGCCAT CATAGCCGTC GTTCTCAGCT TCATCGTCCT CGTAGGATGG GGCTATCTCT CGGAATACAT GGGCTGGACG CCCAAATCCG TTCCGGCGAC CGAACAGAAG ACTGCTGCTT CCGCACCCGC ACCGTCAGTC GTGACCTCCG CACCGGAGGC CGTGACCCCC GCCCCCGCCT TCTCGCCTTC CACCGGTCAT GAAGTGACCG TGACGACTCC CCTCTACAAG GCCGTCCTTC ATTCCGGCGG CGGTGTGCTG CGCCAGTTCA TGCTGTCGCG CTACCACATG GGCATCGACC GCGATGCCGC CCCGGTGAAT CTCATCGAAT CTTCCGCCAT CCGCGTGGCG CCGCTGGGCC TTCTGGTCAA CGGGCAGCCC TCGTGGAATA CGGGGCAGTG GGCCTTTGAA GGTGGTGACC TGAACCTTGC CGACGGGCAG ACGGGCACCT TGCGGTTTGT GGGGTCGGTG GACGGGCTGC GCGTTGTGCG CGAGCTTGAA TTCCATGCCG ACAGCTATCT CGTCACCGAG AAGCTGCACC TTGCGCCCGA GGGCGACGCC CCCCGCACCG CGCGCGTGGG ATTCACCCTT GGCACCACCA GCCTCACCCC GGGTGAGAGC CAGTACAACC TGACCCGTGT GGCATGGTTC GCAGACGGCA GCTTCAGCGA GAAGTCCAGC ACCGGCGATC TTGAAAAGGG CGTTCTCATC GACGGTTCCA TCGACTGGGC CGGGGTGATG AGCAACTACT TCCTTGCCGC CGTGGCGCCC AAGGACACCC GAGCCGTGCT CAAGGGCAAG CTCGAAGGCG GCGTGTACCG CGTTGCGGTC GAACGCCCCG ACCAGATGGT CAACCCCGGC AACAGCGACG TCATCGTCTG CAACTACTGG TTTGGCCCCA AAGAGCGCGA CCTCCTGAAC GCAGCGCCCA ACAATCTCGG CAAGGCCATC GACCTTGGCT GGTTCGGCTT CATCGCCCGC CCGCTGGTGA CCCTGCTCGA CTTCTTCTAC AAGTACGTGG GCAACTACGG CACCGCCATC ATCCTGCTCA CCATCCTCAT CAAGCTCGTG TTCTGGCCGC TTTCGCACAA GAGCTACAAG TCCATGGAGC AGATGAAGAA GCTCCAGCCC ATGCTCGCCA AGGTGCGTGA GAAGCATGCC GACGACCGCG AGAAGATGAA CGAGGAGATG ATGCGCCTGT ACAAGACCTA CAAGGTCAAC CCCGCAGGCG GCTGTCTTCC CATGCTGGTG CAGATTCCCG TGTTCTTCGG TCTGTATCAG GCCCTTCTCA ATGCCATTGA ATTGCGTCAT GCCCCGTTCA TCGCCCATGT GCCCTTCACC GACATCGTGT GGCTTGCCGA CCTTTCTGCC AAGGACCCGT TCTACGTCAC CCCGCTGGTG ATGGGGGCGA CCATGTTCCT CCAGCAGAAG CTCACGCCTC CCGCGGGAGA CCCCACACAG GCCAAGGTGA TGATGTTCAT GCCGGTGGTG TTCACCTTCC TGTTCCTGAA CTTCCCTTCG GGTCTTGTGG TCTACTGGCT GTGCAACAAC GTCCTGTCCA TCGCCCAGCA GTGGTGGATT CTGCGCAAGG CCTGA
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Protein sequence | MENKRAIIAV VLSFIVLVGW GYLSEYMGWT PKSVPATEQK TAASAPAPSV VTSAPEAVTP APAFSPSTGH EVTVTTPLYK AVLHSGGGVL RQFMLSRYHM GIDRDAAPVN LIESSAIRVA PLGLLVNGQP SWNTGQWAFE GGDLNLADGQ TGTLRFVGSV DGLRVVRELE FHADSYLVTE KLHLAPEGDA PRTARVGFTL GTTSLTPGES QYNLTRVAWF ADGSFSEKSS TGDLEKGVLI DGSIDWAGVM SNYFLAAVAP KDTRAVLKGK LEGGVYRVAV ERPDQMVNPG NSDVIVCNYW FGPKERDLLN AAPNNLGKAI DLGWFGFIAR PLVTLLDFFY KYVGNYGTAI ILLTILIKLV FWPLSHKSYK SMEQMKKLQP MLAKVREKHA DDREKMNEEM MRLYKTYKVN PAGGCLPMLV QIPVFFGLYQ ALLNAIELRH APFIAHVPFT DIVWLADLSA KDPFYVTPLV MGATMFLQQK LTPPAGDPTQ AKVMMFMPVV FTFLFLNFPS GLVVYWLCNN VLSIAQQWWI LRKA
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