Gene Dvul_1907 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1907 
Symbol 
ID4663904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2224767 
End bp2225969 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content64% 
IMG OID639820148 
Productprotein of unknown function UPF0052 and CofD 
Protein accessionYP_967350 
Protein GI120602950 
COG category[S] Function unknown 
COG ID[COG0391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR01826] conserved hypothetical protein, cofD-related 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.434838 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTTCC CCAGCATCCC GCACCCTTTC GAGAGCGATG AGACCCCGCC TGAACTCGGG 
CCCCGCCTGC TGTTCTTCAC AGGCGGCACA GCGCTACGTG GGTTGAGTCG CGAACTCATC
GACCATACCC ACAATTCGGT GCATCTGGTC ACCCCTTTCG ATTCGGGTGG CAGTTCAGCC
ATGCTGCGCA GCTGCATCGC CATGCCTGCG GTGGGCGACC TGCGTAACAG GCTTCTGGCA
CTTGCCGATC GTCGAGTGGT GCCCTCGTCG GTGCTTGATA TCTGCAACAT GCGCCTCCCC
CGCGACGGTG ACAGACAGGC ATTGCTGCAG ACACTCTATG GCATGGCGTC AGCGCGTGAT
GCCGTGTGGC GTGGCGTTCC GCGGGTGTTC GGCGAGGCTT TGCGCGTGCA CCTGCGCTAT
TTCCTCGAGC AGATGCCCGA GGCCTTCGAC CCCAGAGGGG CGAGCCTCGG CAATCTCATC
ATGGCAGGGG GCTTTCTGCA TCATGGCAGG CGCCTTGAAC CGGTGCTGCT TTTCCTTTCG
CGTCTTTTGC GCGTGCGGGG GGTTGTCCTG CCCACGGTGC ATGAGGACCT CCACCTGATG
GCTGAGCTTG CCGACGGGTC GGTCATCGTC GGGCAGCATC GTATAACCGG CAAGGATGCC
CCCGCCATAG CCTCGCCCAT CCGCAGGCTT GCCATCACGC GAAGGTTGCC TGCCGCAGGC
GCTGAAACCG TGGAGGAATA CCGTTCGCCC CTCTCGCCCC TCGCGGCGAC CTATATCGCC
ACGGCAGACC TCATCTGCTA CCCCATGGGC AGCTTCTGGA CGAGTGTCGT GGCGAACCTC
CTGCCCGTCG GCGTGGGAGG TTGCGTGGCA CAGGCCGATT GTCCCAAGGT CTACATTCCC
AATGTGGGGG ACGACCCAGA GCAACTCGGC ATGAGCGTGG CGGCTGCCGT GGCGGTGCTG
CTGGCGACTC TCCGGCGTGA TGCGGGGAGT GATGCGCCCG CGTCGCAACT TCTGCAATCC
GTGCTTGTGG ACACGAGGTC GGGCGAATAC CGGGGCGGGC TTGATGCCGA AGGCATCAGG
GCGCAGGGTG TGACGATCAT CGACCGCCCT CTCATAGATG ACGGCGCCAG TGCCCATGCC
CCGAAGCTGG TGGCACAAGC GCTGTTTGAA CTCGCTGCCC GCAAGGATGA TGGCATGGCA
TAG
 
Protein sequence
MPFPSIPHPF ESDETPPELG PRLLFFTGGT ALRGLSRELI DHTHNSVHLV TPFDSGGSSA 
MLRSCIAMPA VGDLRNRLLA LADRRVVPSS VLDICNMRLP RDGDRQALLQ TLYGMASARD
AVWRGVPRVF GEALRVHLRY FLEQMPEAFD PRGASLGNLI MAGGFLHHGR RLEPVLLFLS
RLLRVRGVVL PTVHEDLHLM AELADGSVIV GQHRITGKDA PAIASPIRRL AITRRLPAAG
AETVEEYRSP LSPLAATYIA TADLICYPMG SFWTSVVANL LPVGVGGCVA QADCPKVYIP
NVGDDPEQLG MSVAAAVAVL LATLRRDAGS DAPASQLLQS VLVDTRSGEY RGGLDAEGIR
AQGVTIIDRP LIDDGASAHA PKLVAQALFE LAARKDDGMA