| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1906 |
|---|
| Symbol | alaS |
|---|
| ID | 4663711 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 2221747 |
|---|
| End bp | 2224386 |
|---|
| Gene Length | 2640 bp |
|---|
| Protein Length | 879 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639820147 |
|---|
| Product | alanyl-tRNA synthetase |
|---|
| Protein accession | YP_967349 |
|---|
| Protein GI | 120602949 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0013] Alanyl-tRNA synthetase |
|---|
| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATCACCG CCAACGAAAT ACGTCGCCGG TTTCTCGAAT TCTACAAGGC TCACGGCCAT
GAGGCCGTGC GTTCGTCGTC GCTCGTCCCC AAGGACGACC CCAGCCTGCT GTTCACCAAT
GCGGGCATGG TGCAGTTCAA GAAGATCTTC CTCGGGCAGG AGAAGCGCGC CTACTCGCGT
GCCACCACCT CGCAGAAATG CCTGCGTGTC GGCGGAAAGC ACAACGACCT TGAGAATGTG
GGCCGCACGG CGCGCCATCA CACCTTCTTC GAGATGCTGG GCAACTTCTC ATTCGGCGAT
TACTTCAAGG AAGACGCCAT CAAGTTCGCA TGGAAGTTCC TCACCGAAGA GCTGAAGCTT
CCCAAGGAAC GCCTCTACGC CACCGTCTTC CGCGACGACG ACGAAGCCGA ACAGCTGTGG
CTGAAGCACT CCGACATCCC GGCCGAACGC ATCTACCGCA TGGGCGAGAA GGACAACTTC
TGGTCCATGG GCGACACCGG GCCATGCGGC CCCTGCTCGG AGATCCTCAT CGATCAGGGC
GAGCACATGA CCTGCGGCCC TGATTGCGGC ATCGGCAAGT GCGATTGCGA CCGGTTCCTC
GAAATCTGGA ACCTCGTCTT CATGCAGTAC GACCAGGACG CCACGGGCAA GCGCGAACCG
CTGCCCAAGC CCTCCATCGA CACCGGCATG GGCCTTGAGC GCATCACCGC CGTGTGCCAG
GGCGTGTTCT CGAACTTCGA CACCGACATC TTCCAGGCCA TCATCCAGTA CACCTGCGGG
CTGGCGAACG TCTCGTACCG CTCCGACGAC GAGACGGACA CGGCACTGCG CGTCATCGCC
GACCACAGCC GCGCCATCGC CTTCATGATC ACCGACGGCA TCCTGCCCTC CAACGAGGGA
CGCGGGTACG TGCTGCGCCG CCTCATCAGG CGTGCCTACC GTTTCGGCAG GCTCATCGGC
CTCACCGACA CGTTCCTGCA CAAGACGGCC CTCAAGGTCG TCGACATCAT GGGTGACGAC
TACCCCGAAC TGCGCGAGAA CAGCGACTTC ATGGCGCGCG TCGTGCGTGA AGAGGAAGAC
CGCTTCAACC GCACCCTCGA CAAGGGCCTG TCCATGCTCG AAGACGAGCT GGCCACCCTG
TCCGCCTCCG GCGCGGCCCG CGTTCCGGGC GATATCGCCT TCCGCCTGTA CGACACGTTC
GGCTTCCCGC TCGACATCGT GAACGACATC GCCGAGAAGC GCGGTTTCAG CGTCGACGAG
GACGGCTTCA AAGCACTGAT GAAGGAGCAG AAGGAGCGCG CCAAGGCCGC GTGGAAGGGG
TCGGGAGAGA AGGACATCGC CAGCCGCTTC CAGCCGTTGC TCGAAGAGGG CATGCGCAGC
GAGTTCATCG GCTACGACCA CCTCTGCGGT GAAGGCCGCA TCGTGGCCCT CATGGACGAA
CACGCCCTCG CCGTCGAGAG GCTCGCCGCC GGGCAGAAGG GCTACCTCGT GACCAACCGC
ACTCCCTTCT ACGGTGCGTC GGGCGGTCAG TCCGGTGACA TCGGCACCAT CGCCTCGCCT
TCCGGCAAGG TGCGTGTCGT CGACACCATC AAGCCCTCTC CCGAACTGGT CGTGCACCAT
GTCGAGGCTG TCGAAGGCGA CATCCTGCTC GACCAGGAAG TCGACCTGAC CGTCACTGAA
GACGACCGTG TGGCCTCTGC CCGCAACCAC ACCTGCACCC ACCTGCTCCA TGCCGCCCTG
CGCCGCGTGC TGGGCGACCA TGTGAAGCAG GCCGGTTCGC TGGTGGCCCC CGACAGGTTG
CGATTCGACT TCACCCACAT CGCCCCCATG ACACCGGAGG AACTCGCCGC CGTCGAGCGC
GAGGTCAACC GTGTCATCAT GGCCGACATC CCCCTCGAAA CCGACCACAT GCACTACGAC
GACGCCGTCA AGCGCGGGGC CATGGCCCTG TTCGGCGAGA AGTACGGCGA CGAGGTTCGC
GTCGTCGCCA TTGCCGACGA ATCGGTCGAA CTGTGCGGCG GCACACACCT GAGGGCCACC
GGACAGGCCG GACTCTTCCT CATCGTCTCC GAAAGCGGCG TCGCAGCCGG GGTTCGCCGC
ATCGAGGCCC TCACGGGCTG GAATGCGATG CATGCCGTCT TGGCACAGCG TAGCGAACAG
GCCCAACTCT CGGCCATGCT CAAGGCACGC CCGGGCGAAA TCGTATCCCG CGTCGAGTCT
CTCCAGAAGG AGAACCGCAC CCTGCGCAAG GACATGGAAC GTGCTGCCGC ACAGGCCACA
TCCGGTCAGG GACGCAACAT CATGGATGAG GCGACCGATG TCGCCGGAGT GAAACTGCTC
GCCGCCAAGG TCGAGGTACC CAACGTCAAG GCACTGCGCG ACCTCATGGA CGACGTGCGC
TCCAAGCTGG TCTCCGGCAT CGCCTGCCTC GCCGCGGTGG ATGGCGATAA GGTTCAGCTC
ATCATCGCCG TCTCCAAAGA CCTTCAGACC CGCTTCACCG CCCCGCAACT GATCAAGGAC
GTGGCAGCGG AAGTCGGCGG TTCCGGTGGC GGGCGTCCCG ACATGGCACA GGCGGGCGGC
ACCAACCCCG CTGGTATCGA CGCCGCATTC GCCAAGTTGC GTTCGCTCAT CGGCGGCTAA
|
|---|
| Protein sequence | MITANEIRRR FLEFYKAHGH EAVRSSSLVP KDDPSLLFTN AGMVQFKKIF LGQEKRAYSR
ATTSQKCLRV GGKHNDLENV GRTARHHTFF EMLGNFSFGD YFKEDAIKFA WKFLTEELKL
PKERLYATVF RDDDEAEQLW LKHSDIPAER IYRMGEKDNF WSMGDTGPCG PCSEILIDQG
EHMTCGPDCG IGKCDCDRFL EIWNLVFMQY DQDATGKREP LPKPSIDTGM GLERITAVCQ
GVFSNFDTDI FQAIIQYTCG LANVSYRSDD ETDTALRVIA DHSRAIAFMI TDGILPSNEG
RGYVLRRLIR RAYRFGRLIG LTDTFLHKTA LKVVDIMGDD YPELRENSDF MARVVREEED
RFNRTLDKGL SMLEDELATL SASGAARVPG DIAFRLYDTF GFPLDIVNDI AEKRGFSVDE
DGFKALMKEQ KERAKAAWKG SGEKDIASRF QPLLEEGMRS EFIGYDHLCG EGRIVALMDE
HALAVERLAA GQKGYLVTNR TPFYGASGGQ SGDIGTIASP SGKVRVVDTI KPSPELVVHH
VEAVEGDILL DQEVDLTVTE DDRVASARNH TCTHLLHAAL RRVLGDHVKQ AGSLVAPDRL
RFDFTHIAPM TPEELAAVER EVNRVIMADI PLETDHMHYD DAVKRGAMAL FGEKYGDEVR
VVAIADESVE LCGGTHLRAT GQAGLFLIVS ESGVAAGVRR IEALTGWNAM HAVLAQRSEQ
AQLSAMLKAR PGEIVSRVES LQKENRTLRK DMERAAAQAT SGQGRNIMDE ATDVAGVKLL
AAKVEVPNVK ALRDLMDDVR SKLVSGIACL AAVDGDKVQL IIAVSKDLQT RFTAPQLIKD
VAAEVGGSGG GRPDMAQAGG TNPAGIDAAF AKLRSLIGG
|
|---|
| |