| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1856 |
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| Symbol | |
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| ID | 4662084 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 2163917 |
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| End bp | 2165050 |
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| Gene Length | 1134 bp |
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| Protein Length | 377 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639820097 |
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| Product | riboflavin biosynthesis protein RibD |
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| Protein accession | YP_967300 |
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| Protein GI | 120602900 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0117] Pyrimidine deaminase
[COG1985] Pyrimidine reductase, riboflavin biosynthesis |
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| TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain
[TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.925266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCCCCG ATTTCACCCC TTTCATGCGC GAGGCCATCG CCCTTGCCGA ACGCGGACGC
TGGTACGCGG CCCCCAACCC CACCGTGGGG GCGGTGCTGG TGCGTGACGG CGAAGTCGTC
GCACGCGGCT GGCACACAGG CTACGGGAAA CCCCATGCCG AGGTGGAATG CCTGCGTGAC
GCCGCGTCGA AAGGAGTCGA CCCTGCACAC TGCACTCTGG TCGTCACGCT GGAACCGTGC
AACCACCACG GCAAGACGCC GCCCTGTTCC CACGCCATCG TCAAGGCGGG CATCACCCGT
GTGGTGGTGG GACTCGCCGA CCCGAATCCC GTAGCCAGTG GTGGCGCCGA GTACCTGCGC
GCCCACGGTG TCACGGTGGA CATGGGCGTC TGCGAACAGG AATGCCACGA CCTTGTGGCC
GATTTTCTCA CGTGGAAGCT CACCGACCTG CCCTACGTCA TCCTCAAACT CGCCAGCACC
CTTGATGGAC GCATCGCCAC ACGTAGCGGG CATTCGCAGT GGATCAGCGG CGAAGAGGCC
CGTGCCACCG TCCATGAACT TCGCGCACGC ATAGGCGAGG CGGGCGGAGC GGTACTGGTG
GGCGGCACCA CGCTCTACAC CGACGACCCG CAGCTCACCG CACGGGTAGC CCCCCTGCCA
CGTCGTCAGC CCATGGCGGT GGTGGCGACA AGGCACCTCC CGCACCATGA CGCCCTGCCA
CGTATCTTCC GTGAACGCCC CGGACAGTGC GTCATATGGA CCGATGCCAT AGGTGCCGGC
ACCGAAGCTG CCGACACGCT GCGTACTTCC GGCGTCTGTG TCATGGCATT GCCGCTCACC
CCGGCTGGCA GGCTCGACCT CCGGGCCGGT CTGGTACGCC TGCGCGACGA CCACGGCGTA
GAGCATGTCC TGTGCGAAGG CGGAGGCAAA CTGGCACTTT CACTCCTTGA GGCGGGTCTC
GTCGGCGAAT TCCATCTGCA CATGGCCCCC AAGATCATCG GCGATGCCGA GGCCGCACCT
CTGTTCGACG GCAGGGCCCC CCTGCACATG GACGAGGCAT TGCGCCTCCG CATGACCGGC
ATCGAACGCC GTGGCGACGA CTGCATCATG ATTCTGCGCC CCGGCAAAGG ATAG
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| Protein sequence | MGPDFTPFMR EAIALAERGR WYAAPNPTVG AVLVRDGEVV ARGWHTGYGK PHAEVECLRD
AASKGVDPAH CTLVVTLEPC NHHGKTPPCS HAIVKAGITR VVVGLADPNP VASGGAEYLR
AHGVTVDMGV CEQECHDLVA DFLTWKLTDL PYVILKLAST LDGRIATRSG HSQWISGEEA
RATVHELRAR IGEAGGAVLV GGTTLYTDDP QLTARVAPLP RRQPMAVVAT RHLPHHDALP
RIFRERPGQC VIWTDAIGAG TEAADTLRTS GVCVMALPLT PAGRLDLRAG LVRLRDDHGV
EHVLCEGGGK LALSLLEAGL VGEFHLHMAP KIIGDAEAAP LFDGRAPLHM DEALRLRMTG
IERRGDDCIM ILRPGKG
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