| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1834 |
|---|
| Symbol | |
|---|
| ID | 4662237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | - |
|---|
| Start bp | 2141140 |
|---|
| End bp | 2141988 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639820075 |
|---|
| Product | apurinic endonuclease Apn1 |
|---|
| Protein accession | YP_967278 |
|---|
| Protein GI | 120602878 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0648] Endonuclease IV |
|---|
| TIGRFAM ID | [TIGR00587] apurinic endonuclease (APN1) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0300993 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGTTGT TCGGAGCCCA CATGTCCGCC GCTGGCGGAG TATCCAACGC CATTCGCGAT
ATCGTCGAGA TTGGCGGCGA AGTGCTGCAA CTGTTCACTG CCAATCAGCG GCAGTGGACG
CCCAAGGCCC CGTCAGCGGC TGACGTCGAG GCGTTCAGGC GCCGTCGTGC GGCGTTCGGG
GGGCCGGTGT TCTCCCATGC CTCGTACCTC ATCAACATCG CCAACGGCGA TGGGGCGGCA
TCGGCGAAGG CGGTGGAGGC CCTTGTGCGC GAGTTCGAGC GTTGTACCGC CCTCGGCGTG
GATGCGGTGG TGCTCCATCC CGGTGCGCAC CTCGGGGCAG GCCGGGGGGC GGGCATCCTG
CGGGCCGCCC GGAACATTGA TGAGGTGTTC GACAGGTGCG GGGGGCAGAC GCCTGCACTG
CTGCTGGAGA ACACCGCAGG GCAGGGTACC TGTCTCGGAG GTGGTCTGAA CGACCTCGCG
GAGATCATCG ACGCTTCGCG CCATGCCTCA CAGCTTGGAG TCTGCCTCGA TACGGCCCAT
GCCTTCGGTG CAGGCTATGC CCTGCATACC GATGAGGGCT ACCGTCGTTG CATGGAGGAC
ATCGAATACG GCCCCGGGCT GGCGGCCGTG CGCCTGTTTC ATGTGAACGA CAGCCTTGTG
CCGTGTGGAA GCCGCAAGGA CAGGCATACG CATATCGGCG AGGGGCAACT GGGTGAGGCC
GCCTTTGTCC GCCTCCTGAA CGACCCGGTC TTTGCGATGC ACCCCATGGT TCTTGAGACA
CCCAAAGAGG ACGGCCATGC CGCGGACAGG CGTAATCTTG CCACGCTTCG TCGGCTTGCA
GGAAGATGA
|
|---|
| Protein sequence | MPLFGAHMSA AGGVSNAIRD IVEIGGEVLQ LFTANQRQWT PKAPSAADVE AFRRRRAAFG
GPVFSHASYL INIANGDGAA SAKAVEALVR EFERCTALGV DAVVLHPGAH LGAGRGAGIL
RAARNIDEVF DRCGGQTPAL LLENTAGQGT CLGGGLNDLA EIIDASRHAS QLGVCLDTAH
AFGAGYALHT DEGYRRCMED IEYGPGLAAV RLFHVNDSLV PCGSRKDRHT HIGEGQLGEA
AFVRLLNDPV FAMHPMVLET PKEDGHAADR RNLATLRRLA GR
|
|---|
| |