Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1824 |
Symbol | |
ID | 4662367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 2130076 |
End bp | 2130816 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639820065 |
Product | extracellular solute-binding protein |
Protein accession | YP_967268 |
Protein GI | 120602868 |
COG category | [E] Amino acid transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0824863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.890252 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCAGA AAGTCCTGCT CACCGTCGCC GCGCTGCTGC TCTCGACCAA CGTCGCCTTC GCAGAGCGCA CCGTCGTCTT CGCCCATGAC GCCACCTGGC CGCCCATGGA ATTCGTCGAC GCCAACAAGC AGATTGTCGG CCTTGCCGTC GACTACGTCG ACGCCATCGC CAAGGAAGCC GGCTTCAAGG TCGTGCACAA GAACGTGGCG TGGGACGGCA TCTTCGCCGG TCTCGCCGCT GGCAAGTACG ACGCCATCGC CTCTTCGGTG ACCATCACTG AAGAACGCAA GAAGGCCATG GACTTCACCA TGCCCTACTT CGACGTCAAG CAGGCGCTCG TGGTTCCCAA GACCACCGAA GCCAAGACCC TCGAAGACAT GAAGGGCAAG ACCCTCGGCG CCCAGATCAG CACCACCGGC CACTTCGCCA TCAAGCGCAC TGCTGGCGTC ACTGCCAAGT CGTACGACGA GATCGGCCTC GCCATGGAAG ACCTCTTCAA CGGCCGCATC GACGGCGTGG TGTGCGACGA CCCCGTTGCC GCCAACTACG CTCTCCAGCA GGAAGAATAC GCCAAGAAGC TGAAGATCGC CTTCATCGTC GACACGCCCG AGAGCGAGTA CTATGGTATC GCCGTCAAGC AGGGCAACAA GGAACTCGTC GACCTCATCA ACAAGGGCAT CGAAGCCGTC AAGGCCAAGG GTATCGACGC GCAGCTGCGC GCCAAGTGGA TCGGCAGGTA G
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Protein sequence | MLQKVLLTVA ALLLSTNVAF AERTVVFAHD ATWPPMEFVD ANKQIVGLAV DYVDAIAKEA GFKVVHKNVA WDGIFAGLAA GKYDAIASSV TITEERKKAM DFTMPYFDVK QALVVPKTTE AKTLEDMKGK TLGAQISTTG HFAIKRTAGV TAKSYDEIGL AMEDLFNGRI DGVVCDDPVA ANYALQQEEY AKKLKIAFIV DTPESEYYGI AVKQGNKELV DLINKGIEAV KAKGIDAQLR AKWIGR
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