Gene Dvul_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1820 
Symbol 
ID4662394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2127378 
End bp2128199 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content60% 
IMG OID639820061 
ProductVacJ family lipoprotein 
Protein accessionYP_967264 
Protein GI120602864 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2853] Surface lipoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.571303 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGTTTC GATCAAGGCA ACCCGTGGAG CCCGCCCTGT GCGAAGCCGA GAGGTGTTCG 
CGCTGCGCCT TCACTGGTGT ACGCTTGCTG GCTGCGGTCA TTCTCTGTGC CTGCCTCGTG
GGCGTCAGCC CCGGTGCACA CGCCGCCGGA GACCCGGCAC CCTATGCGGC GCAGACAAGC
GATACCCTTG ACGATTATGA CGTCCCCGAT GCCCACCTTG TCGCCGACCC ACTTGAGGGC
TGGAACAGGA TGTGGTTCGG CTTCAACGAC TTCGTCCTGT TGCGTATAGG CAAGCCCGTC
TACAAGGGCT ACGAGGCGGT CACCCCTGAA GAACTCCGAA GCGGTTTGCG CAACTTCTTC
CACAACATCC TCTTTCCCCT GCGATTCGTG AACAACCTGC TTCAAGGCAG GTTCAACGCA
GCCGGGGTCG AGATGGGCCG CTTCATCGTC AACACGACCG TGGGCATGGG TGGCCTCATC
GACGTCGCCA AGAAGGACAG GCCCGTCGTT CCGGTCGAAG ACGAGGACAT GGGGCAGACG
CTGGGGGTGT GGGGCTTCGG AGAGGGCTTC TACCTTGTCT GGCCCTTCAT CGGGCCAAGC
ACGTTGCGTG ATACCGCCGG ATTCGCCGGC GACTACTTCC TCGACCCCAC GTGGTTCGCT
CTTACACTCG AAGAATCCAT TGCTGCCAAC GGGTACAAGC AACTCAACGG TCTCGGGCCT
GCCATCGATG GCTATGAAGG TCTCAAGTCC GGTTCTGTAG AACCCTACAC GGCTGTTCGC
AACGCCTACA TCCAGTTGCG ACGCGACAAG ATACGCCGTT GA
 
Protein sequence
MMFRSRQPVE PALCEAERCS RCAFTGVRLL AAVILCACLV GVSPGAHAAG DPAPYAAQTS 
DTLDDYDVPD AHLVADPLEG WNRMWFGFND FVLLRIGKPV YKGYEAVTPE ELRSGLRNFF
HNILFPLRFV NNLLQGRFNA AGVEMGRFIV NTTVGMGGLI DVAKKDRPVV PVEDEDMGQT
LGVWGFGEGF YLVWPFIGPS TLRDTAGFAG DYFLDPTWFA LTLEESIAAN GYKQLNGLGP
AIDGYEGLKS GSVEPYTAVR NAYIQLRRDK IRR