| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1791 |
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| Symbol | |
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| ID | 4662546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 2091711 |
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| End bp | 2093285 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639820032 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_967235 |
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| Protein GI | 120602835 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4796] Type II secretory pathway, component HofQ |
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| TIGRFAM ID | [TIGR02515] type IV pilus secretin (or competence protein) PilQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.561359 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCTTCA CGAACACGAT ACTGATGACC ACGTTCACGG CCCTACTCGC CGTCGCGCTC
GTCGCAGGTT GCGCCAGCAA GAAGAAGGAC GAGACCGACC CATTCTTCAG CAAGTGGCAG
AGCCTCGCCA GCAATTCCAC GGGCTTCTCG CCGCCCAAGG TGGTGCGCGA CGTCAAGCCC
AAGACGCTGC TGCGTCAGGA AGAGGTCACC GCCAAGCAAG AGGAGCAGAA GCGCCCGCTG
CCGCAGATGC CCGTCACCCT CAAACTGCAC AATGTCGACG TGGGCGTGGC CCTTCGCAGT
CTTGCCGCCG CCGCCAACAC CAGCATCATC GTCAGCCCCG GCGTCAAGGG CACGGCCAGC
ATCAACGTGA ACAGGGTGCC GTGGGAAGAC GTGTTCAAGG GCATTCTCGC CAGCAACGCG
CTCGATTTCG CATGGCGTGG CGAGCTCATT CAGGTGATGA CCCTCGCCGA CAAGAAGGCA
GAGGTCGAAC GCGAACTGCT CGAGACGCAA CGCATGGCGC AGCAACTCAA GGGCCGCAAG
GTGGGGCCGC TGGTGACCTC GGTCATCGAG GTGCGTTACG CCGAAGCTGC TGAACTCAAG
AAGAACCTTG AAGGCTTCCT CAGCAAGGAC GAACAGAACA AGCCCGTGGG CGCCGTGGTC
GTGGACACGC ACACCAACTC GCTCATCGTA CAGGCCGTTG AGGACGACCT TTCCAAGATC
ATCACGCTCG TCAACAACCT CGACAAGCCC CGCGCACAGA TACTGCTCAA GGCGCACATC
GTCGAAGCCA CGCGCGACAC CGCGCGCGAC CTTGGCATCC AGTGGGGTGG CGTGGGTCGT
TCCGGCAACA TGGGCGACGG CAACCGCATG TGGGTAACCC CCGGCGGTTC GGGGCCCACC
AAGCCCACAG ACCCGCAGGC AGGAGGCGGC GTACCTGTCA TCCCGCCGGG CGGCCTCAGC
GGGCAGGGCT TCGGCATGAA CTTCCCGGTG AACAAGGCGG GCAAGACGGC CATGGGTTCG
CTGGGCCTCA TGTTCGGCAC CATCGGCGGC AACATGCTCG AAGTGCAGCT TTCGGCCCTG
CAGGACAATG GCAAGCTCAA CATCCTCTCG TCGCCCTCCA TCTCCACGCT GGACAACCAG
ATGGCGTTCA CCGAGAACGG CGAGAAGGTA CCTTACGTAT CCACCAACGC ACAGGGCGAC
CGCGAAGTGA AGTTCGAAGA CGCGGTGCTG CGCCTTGAAA TCACCCCGCA CGTCATCGAC
GAGTCCAACC TCAAGCTCAA GGTGCAGGTC AAGAAGGACG AGGTCGACCT CACCCGCACG
GTTGAGGGCA ACCCCTTCAT CATCAAGAAG CAGACCGAGA CGACACTCAT CGTGCAGGAC
GGCGAGACGG TGGTCATCTC AGGCCTCACC AAGGAGCGCA GCAGCTCCCG CAGACAGGGC
CTGCCCTACC TGCAGGATGT AGAGGGCATC GGCGCGCTGT TCGGCAACGA CTCGAAGGCG
AACAAGCTTG AGGACGTGCT GATATTCATC ACGCCCGCCA TCCTGCCCTA CCGCGAGGAA
ACCAGCGTCA ACTAG
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| Protein sequence | MRFTNTILMT TFTALLAVAL VAGCASKKKD ETDPFFSKWQ SLASNSTGFS PPKVVRDVKP
KTLLRQEEVT AKQEEQKRPL PQMPVTLKLH NVDVGVALRS LAAAANTSII VSPGVKGTAS
INVNRVPWED VFKGILASNA LDFAWRGELI QVMTLADKKA EVERELLETQ RMAQQLKGRK
VGPLVTSVIE VRYAEAAELK KNLEGFLSKD EQNKPVGAVV VDTHTNSLIV QAVEDDLSKI
ITLVNNLDKP RAQILLKAHI VEATRDTARD LGIQWGGVGR SGNMGDGNRM WVTPGGSGPT
KPTDPQAGGG VPVIPPGGLS GQGFGMNFPV NKAGKTAMGS LGLMFGTIGG NMLEVQLSAL
QDNGKLNILS SPSISTLDNQ MAFTENGEKV PYVSTNAQGD REVKFEDAVL RLEITPHVID
ESNLKLKVQV KKDEVDLTRT VEGNPFIIKK QTETTLIVQD GETVVISGLT KERSSSRRQG
LPYLQDVEGI GALFGNDSKA NKLEDVLIFI TPAILPYREE TSVN
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