| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1740 |
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| Symbol | rpsD |
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| ID | 4663092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 2051717 |
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| End bp | 2052343 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639819980 |
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| Product | 30S ribosomal protein S4 |
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| Protein accession | YP_967184 |
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| Protein GI | 120602784 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0522] Ribosomal protein S4 and related proteins |
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| TIGRFAM ID | [TIGR01017] ribosomal protein S4, bacterial/organelle type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0408943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | TTGGCTAAGT ATACCGATGC TAAGTGCCGT CAGTGCCGCC GTGAAGGTAC CAAGCTTTTT
CTGAAGGGCG ACCGTTGCTT CACCGATAAG TGCGCTTTCG ATCGTCGTCC CTACGCTCCC
GGCCAGCATG GCCGCGCGCG CAAGAAGGTA AGCGACTACG CCGTCCAGCT GCGTGAGAAG
CAGAAGGTCC GTCGTATGTA TGGCATCCTC GAACAGCAGT TCCACGCGTA TTTCACCAAG
GCCGACATGG CCAAGGGTGT TACCGGTGCG AACCTTCTTT CGCTGCTCGA GAGACGCCTT
GACAACGTCA TCTACCGCCT TGGTTTCGCA AACTCGCGTA ACCAGGCTCG TCAGCTCGTC
CGTCACGGGA TCTTCACCCT CAACGGCCGC AAGGTGAACA TTCCTTCCTT GCAGGTCCGT
ATCGGTGACA CGATCGAAGT GCCTGAAAAG AGCCGCAAGA TCCCCGTGCT GGCCGAAGCG
CAGGAAGTGA TCGCCCGCCG TGGCTGCCCC GCATGGCTTG AAGCCGACGG CGCGAACTTC
CGCGGCGTTG TGAAGGCCCT GCCGCAGCGC GAAGACATTC AGTTCCCGAT CAACGAGCAC
CTGATTGTCG AGCTTTACTC CAAATAA
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| Protein sequence | MAKYTDAKCR QCRREGTKLF LKGDRCFTDK CAFDRRPYAP GQHGRARKKV SDYAVQLREK
QKVRRMYGIL EQQFHAYFTK ADMAKGVTGA NLLSLLERRL DNVIYRLGFA NSRNQARQLV
RHGIFTLNGR KVNIPSLQVR IGDTIEVPEK SRKIPVLAEA QEVIARRGCP AWLEADGANF
RGVVKALPQR EDIQFPINEH LIVELYSK
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