Gene Dvul_1739 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1739 
Symbol 
ID4663096 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2050661 
End bp2051704 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content57% 
IMG OID639819979 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_967183 
Protein GI120602783 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0691433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCATCA AACAAGGCGA CAGGCTTATC AACACGCGGA ACTGGTCGGA ACTGGTCAAG 
CCGGAGCAGA TCTCCCGGGA TGGCGAAGTC TCCGACACCA TGTACGGAAA GTTCGTCTGC
GAGCCTCTGG AGCGCGGGTA TGCAACGACC ATCGGCAATG CCATGCGTCG CGTGCTTCTC
TCTTCTCTTC AGGGTGCTGC GTTCGTGGCG GTCAAGATCT CGGGCGTACA GCACGAGTTC
ACCACCATCC CCGGCGTGCT CGAAGACGTG ACCGATGTCG TGCTGAACCT CAAGCAGGTT
CGTCTTGCCA TGGACACCGA AGAGCCCCAG TATCTGGAGC TCAAGGTGGA CAAGAGGGGC
GCGATCACCG CTGGTGACGT AAGAACCAAC CAGCATGTCA TGGTTCTCAA CCCTGATCAG
CATATCGCGA CCCTGACCGA GGACATCGAG CTCACCTTCG AGCTCGAGGT CCGCATGGGC
AAGGGCTACG TGCCCGCCGA TATGCATGAA GGGCTCAGCG AGGAGATCGG CCTCATCAAA
CTCGACGCCA GCTTCTCGCC CGTGCGCAAA GTCGCCTATA CGGTTGAGCA GGCTCGCGTC
GGCCAGATGA CGAACTATGA CAAGCTCATT CTCGAAGTCT GGACCGACGG TTCAGTCTCT
CCCGAGGATG CGATTGCCTA CAGCGCGAAG ATCATCAAGG ACCAGATTTC CGTCTTCATC
AACTTCGATG AGCGGATTTC GGGCGAAAAC TCGAACGGGT CTGCCGATTC CGGTGAATTC
AACGAGCATC TCTTCAAGAG CATCGATGAG CTCGAACTTT CCGTTCGTGC CACCAACTGC
CTGAAGAGCG CCAATATCGC CCTCGTGGGT GAACTGGTCC AGAAGTCCGA GAACGAGATG
CTGAAGACCA AGAACTTCGG TCGCAAGTCG CTTGACGAAA TCCGTCGGGT GCTTGGTGAC
ATGGGGCTCG ACTTCGGCAC CAAGGTCGAC GGCTTCGAGA AGAAATATCA GGAATGGAAG
AGGAAGCAGC AACATGAGGC ATAG
 
Protein sequence
MLIKQGDRLI NTRNWSELVK PEQISRDGEV SDTMYGKFVC EPLERGYATT IGNAMRRVLL 
SSLQGAAFVA VKISGVQHEF TTIPGVLEDV TDVVLNLKQV RLAMDTEEPQ YLELKVDKRG
AITAGDVRTN QHVMVLNPDQ HIATLTEDIE LTFELEVRMG KGYVPADMHE GLSEEIGLIK
LDASFSPVRK VAYTVEQARV GQMTNYDKLI LEVWTDGSVS PEDAIAYSAK IIKDQISVFI
NFDERISGEN SNGSADSGEF NEHLFKSIDE LELSVRATNC LKSANIALVG ELVQKSENEM
LKTKNFGRKS LDEIRRVLGD MGLDFGTKVD GFEKKYQEWK RKQQHEA