Gene Dvul_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1704 
Symbol 
ID4663395 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp2013706 
End bp2014728 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content62% 
IMG OID639819943 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_967148 
Protein GI120602748 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00817913 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.680282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTCTTC TCGTCACCGG CGGCTGCGGC TTCATCGGCA CCAATTTCAT CCGGCACGTG 
CTCGCCGTCC GCCCTGAAGT CTCGGTCGTC AACTTCGACA AGCTCACCTA CGCGGGCAAC
CCCGCCAACC TCACCGACAT CGAAGGCGAA CACGGCGGCA ACCGCTACCG TTTCGAACAT
GGCGACATCG CCGACGCCGG ACGGGTGCGC GACATTCTCG AACGCCATGC CATAGACGCC
ATCGTCAACT TCGCCGCCGA GACCCATGTC GACCGTTCCA TCAACGACTC GACGCCCTTC
ATCACGACCA ACGTGCTGGG CACGCAAGTC CTGCTTCAGG CGGCCCTCGA CAGGGGAATA
CCCCGTTTCG TCCACATATC CACAGACGAA GTCTATGGGA CCCTCGGCCC TGACGGACTG
TTCAGGGAAG ACACCCCCCT TGCGCCCAAC AGCCCCTATT CCGCCTCGAA GGCGGGGGCA
GACCTCATGG TGCGCGCCTT TCACGAGACC TACGGCCTCG ACACCGTGAC CACCCGCTGT
TCCAACAACT ACGGGCCCTA CCAGTTTCCC GAGAAGCTCA TTCCGCTCAT GTACCGCAAG
GCGACAGCGG GCGAACCGCT ACCCGTATAC GGCGACGGCG GCAATGTCCG CGACTGGATA
CATGTCGAAG ACCATTGCCG GGGCGTATTG CTGGCACTGG AGAAGGGACG CCCCGGCGGC
ATCTACAACT TCGGCGGTGC GTCCGAGAGG ACGAACCTCG AGGTCGTACG GCTGATACTG
AAACTGACGG GTCGCACCGA AGAGCTCATC CGATTCGTGA AGGACAGACC GGGGCACGAC
AGGCGCTACG CCATGGACTT CACCCTTGCT GCCCGTGAAC TTGGCTACGC CCCTGAACAC
AGTTTCGAAA ACGGCCTTGC TGCCACCATA GACTGGTACC GCGCCAATGA TGCGTGGCTT
GCCAGTGTGG AATCGGGAGC GTACAGGGAA TTCATGGACC GCTGGTATGG AGACAGACGA
TGA
 
Protein sequence
MRLLVTGGCG FIGTNFIRHV LAVRPEVSVV NFDKLTYAGN PANLTDIEGE HGGNRYRFEH 
GDIADAGRVR DILERHAIDA IVNFAAETHV DRSINDSTPF ITTNVLGTQV LLQAALDRGI
PRFVHISTDE VYGTLGPDGL FREDTPLAPN SPYSASKAGA DLMVRAFHET YGLDTVTTRC
SNNYGPYQFP EKLIPLMYRK ATAGEPLPVY GDGGNVRDWI HVEDHCRGVL LALEKGRPGG
IYNFGGASER TNLEVVRLIL KLTGRTEELI RFVKDRPGHD RRYAMDFTLA ARELGYAPEH
SFENGLAATI DWYRANDAWL ASVESGAYRE FMDRWYGDRR