Gene Dvul_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1662 
Symbol 
ID4663849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1976370 
End bp1977350 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content63% 
IMG OID639819901 
ProductD-isomer specific 2-hydroxyacid dehydrogenase, NAD-binding 
Protein accessionYP_967106 
Protein GI120602706 
COG category[C] Energy production and conversion
[H] Coenzyme transport and metabolism
[R] General function prediction only 
COG ID[COG1052] Lactate dehydrogenase and related dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.418271 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCG TCGCCCTCGA CGGCTACACC CTGAACCCGG GTGACATTTC ATGGGCCCCC 
ATCGAAGAAC TGGGAGAGCT TGTCGTCCAT CCCCGCACCC CGTCAGACAA GATCATTGAA
CGTGCTGCCG GGGCCCATGT CGTGCTCACC AACAAGGTGC CCCTCGACAT GAGCGCACTG
CAGGCATTGC CCGGGCTGCG TTTCGTCTCC GTGCTTGCCA CGGGCTACGA CAAGGTGGAT
GTGGCTGCCG CCGGTGTACT GGGCATCCCC GTCTCCAACG TCCCCGGCTA CGGCACCGAC
TCGGTGGCGC AGCATGTGTT CGCCCTGCTT CTTGAACTCT GCCGCAGAAC GGCACTCCAT
GACCATCGTA TCCGCGCCGG GGCATGGACA CAGAGTCCCG ACTGGTGCTT CTGGGACTCT
ACGCAAGAAG AGCTCACGGG CAAGACCATG GGCATTGTCG GCTTCGGCAA TACGGGTCGG
CGTGTGGGCC GTATTGCCAA TGCGCTGGGC ATGAACGTTA TCGCGTATGC TCCACGCAGT
CGTTTCGACC CGGATTATCG CCCCTTCGAA CATGTGGGGC TTGACGAACT GTTCACCTCC
GCCGACGTGG TGAGTCTGCA TTGTCCGCTC ACACCCGAAA CAGAGGGTCT GGTCGATGCC
AGACGTCTCG CATCCATGCG CCCCGGCAGC TACCTCATCA ACACCGCACG CGGCCCCCTG
CTGGACGAAA GGGCCGTTGC CGAAGCCCTC GACAGCGGGC GTCTCGCCGG TGCCGGACTG
GATGTCCTCT CGCAGGAACC ACCCGCGGCA GACAATCCGC TGCTTTCCGC AAAGAACTGC
CTCATCACGC CGCATCTGGC TTGGGCGTCG CGCACGGCGA GACGGACACT CATGGACTCG
ACCGCAGCCA ACATCCGTAG CTTTATCGAA GGAACCCCGG TCAATGTCGT GAACGCGGCA
CACCTGCGGA CGAAGGGATA G
 
Protein sequence
MRIVALDGYT LNPGDISWAP IEELGELVVH PRTPSDKIIE RAAGAHVVLT NKVPLDMSAL 
QALPGLRFVS VLATGYDKVD VAAAGVLGIP VSNVPGYGTD SVAQHVFALL LELCRRTALH
DHRIRAGAWT QSPDWCFWDS TQEELTGKTM GIVGFGNTGR RVGRIANALG MNVIAYAPRS
RFDPDYRPFE HVGLDELFTS ADVVSLHCPL TPETEGLVDA RRLASMRPGS YLINTARGPL
LDERAVAEAL DSGRLAGAGL DVLSQEPPAA DNPLLSAKNC LITPHLAWAS RTARRTLMDS
TAANIRSFIE GTPVNVVNAA HLRTKG