Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1636 |
Symbol | |
ID | 4664104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 1937477 |
End bp | 1939171 |
Gene Length | 1695 bp |
Protein Length | 564 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 639819875 |
Product | hypothetical protein |
Protein accession | YP_967080 |
Protein GI | 120602680 |
COG category | [N] Cell motility |
COG ID | [COG1749] Flagellar hook protein FlgE |
TIGRFAM ID | [TIGR03506] fagellar hook-basal body proteins |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0290752 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCCTTA CCGCAAGCAT GTGGACGGGC GTTTCAGGAC TGCTCGCCCA CGGCGAGAGG ATGAACGTCC TCGGCAACAA CATCGCCAAC GTCAACACCG TCGGCTTCAA AGGCAGCCGT ATGGACTTCG AAGACTTCCT CAATCAGGAC ACCTACAGCG CAGCGGGCGT GACGCAGGTC GGTCGCGGCG TGAGCATCGG TGCCATCTTC GGGGACTACA GCCAAGGGGC CTTCCAGACC ACCAACGAAT CCACCGACCT TGCCATTCAG GGGCGGGGCT TCTTCTCGGT GAAGCCCAAG GGAACGGAAG ACACCTACTA CACCCGCGCG GGCAACTTCA GGTTCGATGC CGACGGCTAC CTCGTAGACC CGCATGGCTA CGTCCTGCAG GGGTGGGCCA TCGAGCGCAG CCAGAATTCG CTCACCTCGT CCGCGGTCAC CGCCACCAGC ACCACGTCCA AAATCAAGGG TTCCGGTGTG CCTGTGGACA TCAAGCTCGA CGGTTTCACC GCCGAACCGC AGCACACCCA GAACATCACG CTCAATGTCA ACCTCGACTC CAATCCGGGT AACGACAAGA GCAGCAGCAC CACGAACCCG TATTTCTCAC TCTTCGAGAC ATGGAACGGC CAGAACCCCC TCACGGGCAC ACAGCCTGCC CTCGCCCAGT CGGCGTTCGC CTATCAGTCC ACCATCAAGG TCTATGACGA AGCCGGCACC GCCCACACCC TCACCGTCTA CTTCGACCAG GTCGACCCCG ATAGCGTGAC CAACGAACCC AATGGTCGCA AACAATGGGA ATACATCGTC ACCATGGACC CGGCCGAGGA CAAGCGCGTC ATCGCCGGTA CGGCCATGAA CACCACTCGG GCGGCGGGCC TGCTGATGAC GGGTACACTC ACGTTCGACA CAACGGGGCA GCTTGTCGAC CAGACAGCCT TCACCCCCTT CGGTCAGTAC ACGGACACCA CCCCCCCGTG GAACGAACCT ACGCCCAACC CCGGCCCGCC TGTCACCACG CCTGCCGACC TCGTCAACTG GCAGCCTACG CAGATGTCCT CCAACGGACT TCCCATGATG GTGGCGAACT TCTCGGGCCT TACCGACTCG AGCGTGGTAG GTTCTCCCAC GGCACAGAAC TTCCTCATGG AACTCGACCT CGGCTTGCGC TCGACCAACG CGACCACGCC GTGGACATCC ACCCCCAACG CCGCCGCCAT CGGTACGGAC GCCTCGCTGC TGCCGGGTCT GACCTCTTCG CAGCGCCAGC CCAGTGCAAC GACAAGCTAC GCCGGTTCGT CATCGACACA GTTCCAGAAG CAGGACGGCT ACACGTTCGG CTTCTTGCAG AACATCACTG TCGACCGTGA CGGCATCATG CAGGGGAAGT ACTCCAACGG TGTGACTCTC GACCTCTATC AGGTCACCCT CGTGGACTTC ACCAGCAAGC AGAACCTGCG CCGAGAGGGC GGCAACCTCT TCAGCGGCAC ACGAGATTCC GGCGACCCTC TGCCCGGCCC TGCCAACAGC AACGGCCTCG GGGCCATCAG CTCGAATTCA CTCGAGCAGT CCAACGTCGA CCTTGCCCGC GAATTCGTGG AGATGATCAC CACGCAACGA GGTTTCCAGT CCAACAGCAA GGTCATCACA ACCACTGACA CCATGCTTGA AGTGGTCGTG AACATGAAGC GTTAA
|
Protein sequence | MSLTASMWTG VSGLLAHGER MNVLGNNIAN VNTVGFKGSR MDFEDFLNQD TYSAAGVTQV GRGVSIGAIF GDYSQGAFQT TNESTDLAIQ GRGFFSVKPK GTEDTYYTRA GNFRFDADGY LVDPHGYVLQ GWAIERSQNS LTSSAVTATS TTSKIKGSGV PVDIKLDGFT AEPQHTQNIT LNVNLDSNPG NDKSSSTTNP YFSLFETWNG QNPLTGTQPA LAQSAFAYQS TIKVYDEAGT AHTLTVYFDQ VDPDSVTNEP NGRKQWEYIV TMDPAEDKRV IAGTAMNTTR AAGLLMTGTL TFDTTGQLVD QTAFTPFGQY TDTTPPWNEP TPNPGPPVTT PADLVNWQPT QMSSNGLPMM VANFSGLTDS SVVGSPTAQN FLMELDLGLR STNATTPWTS TPNAAAIGTD ASLLPGLTSS QRQPSATTSY AGSSSTQFQK QDGYTFGFLQ NITVDRDGIM QGKYSNGVTL DLYQVTLVDF TSKQNLRREG GNLFSGTRDS GDPLPGPANS NGLGAISSNS LEQSNVDLAR EFVEMITTQR GFQSNSKVIT TTDTMLEVVV NMKR
|
| |