Gene Dvul_1616 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1616 
Symbol 
ID4664413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1916121 
End bp1916798 
Gene Length678 bp 
Protein Length225 aa 
Translation table11 
GC content66% 
IMG OID639819854 
Productsiroheme synthase 
Protein accessionYP_967060 
Protein GI120602660 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG1648] Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) 
TIGRFAM ID[TIGR01470] siroheme synthase, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCCT ATCCCCTCTT CATGCGGCTT GATGGTTGCC GATGCCTCGT CGTCGGCGCA 
GGCGGCGTGG GACGCCGCAA ACTGGCGGCA CTCATCCCCT GCGGCGCCGC CGAGATACTC
GTCCTCGACA CGTCGCCGCC CGATGCCGAA CTGGCAGCCC TGCTCGCCTG CCCCGGCGTC
CGCTTCGAAC AGCGCACCTT CTCGGCCGAC GACCTTGCAG GCCGTTCGCT GGTGTTCGCC
GCCACAGGTG TGCCCGCAGT CAATGCCGAC ATCGCCCGCC TCTGCCGCGA TGGCGGCGTA
CTCTGCAACG TCATCGACGA CCCCGCTGCC GGTTCGTTCA TCGTCCCGGC GCACTTCGCC
TGTGGCGACA TCACCGTCGC CCTGTCTACG GGGGGGCACA GCCCTGCGCT GGCACGCCGC
ATCCGCATGG ACCTTGAAGC ATGGTTCGGC AACCGTTACG ACGGACTTGT GGTGTTGATG
GGCAGACTTC GGCCACTCGT CCTTGCACTC GGCGACGAGA CAGGGCAGAA TGCGGCCCTC
TTTCGCACCA TCGTAGGCTC ACCGCTTGTG GACGCCCTCG CCGCGAAGGA CAGGCAGCGG
TGTGAAGACC TTCTCCACAC CCTGCTTCCC GTCGAACTGC ACCCGCACAT CGTGGAGTTG
CTGCATGATA TCGCCTGA
 
Protein sequence
MRPYPLFMRL DGCRCLVVGA GGVGRRKLAA LIPCGAAEIL VLDTSPPDAE LAALLACPGV 
RFEQRTFSAD DLAGRSLVFA ATGVPAVNAD IARLCRDGGV LCNVIDDPAA GSFIVPAHFA
CGDITVALST GGHSPALARR IRMDLEAWFG NRYDGLVVLM GRLRPLVLAL GDETGQNAAL
FRTIVGSPLV DALAAKDRQR CEDLLHTLLP VELHPHIVEL LHDIA