Gene Dvul_1598 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1598 
SymbolmiaA 
ID4664846 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1896798 
End bp1897727 
Gene Length930 bp 
Protein Length309 aa 
Translation table11 
GC content65% 
IMG OID639819835 
ProducttRNA delta(2)-isopentenylpyrophosphate transferase 
Protein accessionYP_967042 
Protein GI120602642 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase 
TIGRFAM ID[TIGR00174] tRNA isopentenyltransferase (miaA) 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACG AGCTTCCGGC CGTCATCTGT CTGGTCGGCC CCACGGGGGC TGGCAAGACG 
GCGGCGGCGC TGCATCTGGC CGAGCGTTTC GCCGGGACGG TCATCAATGC CGACTCGCGG
CAGGTGTACC GCGACTTTCC CATCATCACT GCGCAGCCGA CAGCGGAAGA GCAGGCCCAA
TGCCCGCATC GCCTGTACGG CTTTCTGGAG ACGGAGGCGC GCATGTCTGC CGGGGTGTGG
GGTGACCATG CCACGGCAGC CATCGACGAG GCCCTCGCCC AAGGGCGGCT GCCATTGCTG
GTGGGGGGAA CGGGCATGTA TGTGCGCGCG TTGCTCGATG GCATCGCCGC CATACCCGCC
ATCCCCCGCG ACATTCATGT GCGTTGGCAG GAACGGTGTG CTGCTGAGGG CCCGCAACGG
CTTCATGCCA TGCTCTGCGA TATCGATGCC GAGTACGCGG CGCGCATCCA TCCCAACGAC
AGGCAGCGTG TCACGCGGGC GCTTGAGGTC CATGAGCATA CAGGACGAAC CTTTTCGGAA
TGGCATCGTT CGGCAATGCC CGCACCGCGT TACCGGGCCT TGCGCATCGG TTTCGCTGCC
ACTCTGGATG CCCTGACGCC AAGACTTGCC CATCGGATAG ACCTCATGCT GGCAGCAGGG
GCGCTTGATG AGGCGCGTCG CGCCCGTGTA CACTGTGACG ACCCCTCTGC ACCGGGGTGG
TCGGGCATCG GCTGTGCCGA AACGTACGCC CACCTTGTCG GAAGCCTCGA CTACGAAGCC
ATGCGCCACG TGTGGCTGCA CAACACCCGT GCCTACGCCA AACGGCAGCT CACATGGTTC
CGCGCCGACA CCCGCCTGAC CTGGTACGCG CCTGACGATG TCGAGGGCAT CGCCCTTGGT
GTCGCCTCTT TTTTGCGAGG CGGTGCATAG
 
Protein sequence
MSNELPAVIC LVGPTGAGKT AAALHLAERF AGTVINADSR QVYRDFPIIT AQPTAEEQAQ 
CPHRLYGFLE TEARMSAGVW GDHATAAIDE ALAQGRLPLL VGGTGMYVRA LLDGIAAIPA
IPRDIHVRWQ ERCAAEGPQR LHAMLCDIDA EYAARIHPND RQRVTRALEV HEHTGRTFSE
WHRSAMPAPR YRALRIGFAA TLDALTPRLA HRIDLMLAAG ALDEARRARV HCDDPSAPGW
SGIGCAETYA HLVGSLDYEA MRHVWLHNTR AYAKRQLTWF RADTRLTWYA PDDVEGIALG
VASFLRGGA