Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1588 |
Symbol | |
ID | 4664685 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | - |
Start bp | 1887074 |
End bp | 1889617 |
Gene Length | 2544 bp |
Protein Length | 847 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639819825 |
Product | ATP-dependent helicase HrpB |
Protein accession | YP_967032 |
Protein GI | 120602632 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1643] HrpA-like helicases |
TIGRFAM ID | [TIGR01970] ATP-dependent helicase HrpB |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.41464 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCCTG AACAGACATC CTTCCGGCGT CTCGCGACGC CCTCTCTCGT CTCCGCCCTG CCACGCCTCA CGGATGCGCT GCTTTCGGCC GGGCGCTGCG TTTTTGTTGC CCCACCGGGG GCAGGCAAGA CCACGGTTGT GCCTCTTCAT CTGCTTGATG CCCCGTGGTT GCGGTCGCGG CGCATTGTCA TGCTGGAGCC ACGTCGCCTC GCCGCGCGGG CTGCTGCCCG TTTCATGGCG CGGCTTCTCG GTGAGCAGGT GGGCGAGACG GTAGGCTACC GGATGCGTCT GGACAGCCGT GTCGGGCCAC GTACCCGCAT GGAGGTCGTC ACAGAAGGGG TTCTCGGGCG CATGCTGCAC GACGACCCGA CCCTCGAAGA GTATGGCCTT GTCATCTTCG ACGAGTACCA TGAGCGCAGT CTCCAGGCCG ACCTCGGTCT GGCCCTCTGC CTCGATGTGG CGGATGCCTT GCGCGACGAT TTGCGGCTTC TCGCCATGTC GGCGACACTC GACGCCGCCC CGTTGGGCTC GCTGATGGGC GGGTGTCCCG TCATCGAGTG CGAAGGACGC CAATGGCCCG TCGAGGTTCG CCACGCGCCT CCAGTTAACA GGGCGGGGTA TCCCTCCAGC TTCGAGGACA ATGTCGCCGC CTGCGTTCGC CGTGCGCTTA CCGAGACAGA GGGCGACGTG CTTGTCTTCC TGCCGGGGGG CGGGGAGATA CGGCGTACCG CGCGGCGGCT TGAAGGGCTT GATGCCCACG GCGTCGGCGT GCACATGCTC TATGGCGACC TTGCCCCGGC GTTGCAGGAT GCAGCCCTCG CGCCGGATGC ATCGGGGGGG CGCAAGGTCG TTCTCGCCAC AGCCCTTGCC GAGACCAGCC TCACCATCGA GGGCGTGCGG GTTGTCGTTG ACGGCGGACT GGCCCGTTTT TCCCGGTTCG ATCCGCAAAG CGGCATGAGC CGCCTTGTGA CAGAACGTAT TTCTCTCGCC GGGGCGACGC AGCGCGCAGG TCGCGCAGGG CGTACCGGGC CCGGCTTCTG CTATCGCCTC TGGCATGAGG GCGAGACCGC TTCCCTGCGT CCGTTCGCAC GTCCGGAAGT GCTCGATGCC GACCTCGCCC CCCTGTTGCT GCAGTTGGCT GCATGGGGCG TGCTCGACCC CTCGAAACTC AGGTGGCTCG ACGCTCCGCC AGAGGTCAAC GTCAATCAGG CACGCATCCT GTTGCAATCG CTCGGTGCGA TCGATGCTTC CGGTCGTATC ACCGGTCATG GCAAGTCCAT GAATGCCCTG CCGCTGCACC CGCGTCTTGC GCATATGGTG CTCTCTGCCT GCCGCAGTGG CTCTGCTTCT CTTGCCTGTG TTCTTGCCTG CCTGCTTGAA CAGCGCGGAG TTGCAGAGCG GACGTCCGGT TGCGACATCC GTCCATGGGT CGAAGATGCC GTCAGGCGCA TGAGGCACAA GCCCCGAGGC GCCTCCCGTG AAGGATGGGA GGTGCGTCTG GCATCGTCGG TCGACCGCAT CGCCGCGCTC GCCGGAGTCC GGTTCGATGC TGGCAGGGCC CTGTCAGACG TGGCACGGTG CGGCGTTCTT CTCGGCTTCG CCTTCCCTGA CAGGGTGGCG ATGAACACGG GGGAGGGCAC GTTTCGTCTT TCGTGCGGGC GTGGGGCAGC CGTGCCTGCC GACGATGCGC TGGCACGTGA GCCTTTTCTC GTTGCCGCCG AACTCGACGG TGACGTCACC CGTGCGCGTA TCTGGCGGGC TGCACCTCTC GCTGCGGAAG AGGTGGCGAT GCTCGCCGGG GATGCCATCA CGGAACAGCG CGAGGTCGGA TGGGACGACA GGCGGGGCGT AGCGGTCGCC CATGTCGAAC GCAGGTTCGG AGCACTCGTG CTGGAGCGCC GCCGCATCGA CGACGTCGAT GATACGCTTC TGGCACATGC CGTCATGAGG GGGATTCGTA CGCGCGGGTT GCGGTGTCTT CCGTGGACGC AGGAACTGCG GCAATGGCAG GCAAGGGTCG AGCTCATGCG GCGTCACGAC ACTCCTGGAG GGCAATGGCC CGAGGTCGCA GACACAAGAC TTGAAGCTGA ACTTGAAGAA TGGTTGATCC CCTTTCTGTC AGGCATACGG CGTGCCGAGC ATTTCGCGCG CATCGACCTG CAGAGTGCCT TGAAAAACCT GCTCTCATGG GAACAGGCAC GCCGTCTGGA TGCCGAAGCC CCGACGCATG TGGTGGTCCC TTCCGGTTCA CGTGTGCCCC TCGACTATAC GGCGGAGGGC GGACCCGTGC TTGCGGTCAA GCTGCAAGAG CTTTTCGGCA TGGCCGAATC TCCGGTTGTG GCGGGTGGTG TCTCTGTCGT CGTGCATCTG CTGTCTCCGG CTGGTCGGCC CTTGCAGGTG ACACGCGACC TCGCAGGTTT CTGGCGCACG GGCTACGCTT CTGTCCGCGC AGAGATGCGG GGGCGGTACC CCAAGCATCC ATGGCCGGAA GACCCGCTCA CGGCGATGGC GACCCGCCAT ACGCGAAAAC GGGCAGGGCT GTGA
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Protein sequence | MPPEQTSFRR LATPSLVSAL PRLTDALLSA GRCVFVAPPG AGKTTVVPLH LLDAPWLRSR RIVMLEPRRL AARAAARFMA RLLGEQVGET VGYRMRLDSR VGPRTRMEVV TEGVLGRMLH DDPTLEEYGL VIFDEYHERS LQADLGLALC LDVADALRDD LRLLAMSATL DAAPLGSLMG GCPVIECEGR QWPVEVRHAP PVNRAGYPSS FEDNVAACVR RALTETEGDV LVFLPGGGEI RRTARRLEGL DAHGVGVHML YGDLAPALQD AALAPDASGG RKVVLATALA ETSLTIEGVR VVVDGGLARF SRFDPQSGMS RLVTERISLA GATQRAGRAG RTGPGFCYRL WHEGETASLR PFARPEVLDA DLAPLLLQLA AWGVLDPSKL RWLDAPPEVN VNQARILLQS LGAIDASGRI TGHGKSMNAL PLHPRLAHMV LSACRSGSAS LACVLACLLE QRGVAERTSG CDIRPWVEDA VRRMRHKPRG ASREGWEVRL ASSVDRIAAL AGVRFDAGRA LSDVARCGVL LGFAFPDRVA MNTGEGTFRL SCGRGAAVPA DDALAREPFL VAAELDGDVT RARIWRAAPL AAEEVAMLAG DAITEQREVG WDDRRGVAVA HVERRFGALV LERRRIDDVD DTLLAHAVMR GIRTRGLRCL PWTQELRQWQ ARVELMRRHD TPGGQWPEVA DTRLEAELEE WLIPFLSGIR RAEHFARIDL QSALKNLLSW EQARRLDAEA PTHVVVPSGS RVPLDYTAEG GPVLAVKLQE LFGMAESPVV AGGVSVVVHL LSPAGRPLQV TRDLAGFWRT GYASVRAEMR GRYPKHPWPE DPLTAMATRH TRKRAGL
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