Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dvul_1586 |
Symbol | |
ID | 4664642 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfovibrio vulgaris DP4 |
Kingdom | Bacteria |
Replicon accession | NC_008751 |
Strand | + |
Start bp | 1882643 |
End bp | 1884268 |
Gene Length | 1626 bp |
Protein Length | 541 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639819823 |
Product | putative PAS/PAC sensor protein |
Protein accession | YP_967030 |
Protein GI | 120602630 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2202] FOG: PAS/PAC domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.822014 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCTGA ACGAACTCGT CGACTTCTAC AGGCCGCGCC TCGATGCCTC GCCTGACCTG GGATTGCTTC TCGACGGGCA CGGCAACGTG CTGCACGCGA ACGGGCCTCT TCGCAGCCTG TTCGATGAGG GATACACGAG CGCACAGCCT GAAGGCGTGG CGCGGCAATT GCTCGACAAC ATGAGGACCT CGGAGCGCGA CACTGCCGCC CCCGTGCATG AAACACGGCT GCGCATGGCG CTACCCGACG GTGCCGGCAT CAGGCAGGTG GACTGGAAGA CCCTGACCAT TCCCGCTGCG GAAGGACGGC TTCTGCTGGC GTGGGGCAGA TTGCGCACCA CCGAGGGCGG GCGGGAGATG GGCTTCACCA TCCTGCCCAA CGGCAACATC AGCGCTGTCA GCCCCATGCT GAGCGCCATC TGCGGCTATG CCCCCGACGA ACTAATCGGC AGACCGGCGC GACAGTTCTA TTACACGGAT ACCGCACGGC GGCGCGTCGT CAGCCAATTG CTCGAGAAGA AGGAAGTGGA GAACGGCGAG GTGACGTTGC GCCGCAAGGA CGGTTCACCG CTCATCCTCT GGTACAGTGC CGAATCCATC CGGGACGCTT CGGGGTCGAT GGTCGCCTAC AGCGGTTATT TCCAGCAACG CCCCTTCGTG TTCTCGTCCA AGCTTGCCAA CGACTTCGCA CGCATCGTCG ATGCCCTGCC AGGCGTGGCG TGGGTGTGCG GACGCGACCT GCGCATCGTC GCCGTCAACG ACAGCTACCT CGAAGCCTAC AACCGCAGCC GCAACGACGT CATTGGGCGC ACCGAGCATG ACTTTCTGCC TGCAGAACAG GCTCGCTATC TGGTGGAGGC GGCGTTGCGA GTGTTCGAAG AGAAGCAGGA GTTGCTGCAC CCGGCCGTAC CCCACCTGCT CGACCCCGCA GTATGGTTCC GCACGGTACG CCGCCCCATC TTCGATGATG CCCGGCAAGA GGTCATCGGG TTGCTTGGCA TCGCACAGGA CATCTCCGGC AAGGTGCGGC AGGAGAACGT ATTCATGGAG CAACTACGCG CGACGGAGTC CGACGTGGTG GTGGTCACCG ACGACCAGGG ACGCATCCTG CGTCGATCAT TGCAGACCCT CTCGCCATCC ATTTTCGGCA AGCGCGAACC CTTCGAGGCG TACACCCTCG ACATGCGCCC CGTTCTCGAC CTGCTCGACG TCGACGACCT GCCCAAGGTG CGGCAGGCGC TCCATGCCGC CTTGCGTGAA CATCGCGAAC AGCACATCGA ATGCCGGATT CGCAATCTGA CGGGTTCATA TACGACCGTA CTCGCAAGAC TCGTATTCAA CGACACCATC TATGGCGAAC CACGGATGTA TGTCGTTGCC CGCGACATCG GCGGCGAGAT GGAACTGCGC CAAGCCTCGA TGGTCATCGA ACGCCTGAAA GAAGCCGCAA GAGCGAAAAC AGACAGGGAA CTGGCCCGCT TCCTCAATGT CTCTGCCGCG TCCATTTCCA ACGCCCGCAA AAACGACCGG GTCCCCCCCG ACTGGATCAT CGATACAGGC CTTCGCACAG GCCGTTCCAT CGACTGGCTC GTACGCGGCA TACTCTCTGA CATTCATTCG GCCTGA
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Protein sequence | MTLNELVDFY RPRLDASPDL GLLLDGHGNV LHANGPLRSL FDEGYTSAQP EGVARQLLDN MRTSERDTAA PVHETRLRMA LPDGAGIRQV DWKTLTIPAA EGRLLLAWGR LRTTEGGREM GFTILPNGNI SAVSPMLSAI CGYAPDELIG RPARQFYYTD TARRRVVSQL LEKKEVENGE VTLRRKDGSP LILWYSAESI RDASGSMVAY SGYFQQRPFV FSSKLANDFA RIVDALPGVA WVCGRDLRIV AVNDSYLEAY NRSRNDVIGR TEHDFLPAEQ ARYLVEAALR VFEEKQELLH PAVPHLLDPA VWFRTVRRPI FDDARQEVIG LLGIAQDISG KVRQENVFME QLRATESDVV VVTDDQGRIL RRSLQTLSPS IFGKREPFEA YTLDMRPVLD LLDVDDLPKV RQALHAALRE HREQHIECRI RNLTGSYTTV LARLVFNDTI YGEPRMYVVA RDIGGEMELR QASMVIERLK EAARAKTDRE LARFLNVSAA SISNARKNDR VPPDWIIDTG LRTGRSIDWL VRGILSDIHS A
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