Gene Dvul_1586 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1586 
Symbol 
ID4664642 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1882643 
End bp1884268 
Gene Length1626 bp 
Protein Length541 aa 
Translation table11 
GC content62% 
IMG OID639819823 
Productputative PAS/PAC sensor protein 
Protein accessionYP_967030 
Protein GI120602630 
COG category[T] Signal transduction mechanisms 
COG ID[COG2202] FOG: PAS/PAC domain 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.822014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCTGA ACGAACTCGT CGACTTCTAC AGGCCGCGCC TCGATGCCTC GCCTGACCTG 
GGATTGCTTC TCGACGGGCA CGGCAACGTG CTGCACGCGA ACGGGCCTCT TCGCAGCCTG
TTCGATGAGG GATACACGAG CGCACAGCCT GAAGGCGTGG CGCGGCAATT GCTCGACAAC
ATGAGGACCT CGGAGCGCGA CACTGCCGCC CCCGTGCATG AAACACGGCT GCGCATGGCG
CTACCCGACG GTGCCGGCAT CAGGCAGGTG GACTGGAAGA CCCTGACCAT TCCCGCTGCG
GAAGGACGGC TTCTGCTGGC GTGGGGCAGA TTGCGCACCA CCGAGGGCGG GCGGGAGATG
GGCTTCACCA TCCTGCCCAA CGGCAACATC AGCGCTGTCA GCCCCATGCT GAGCGCCATC
TGCGGCTATG CCCCCGACGA ACTAATCGGC AGACCGGCGC GACAGTTCTA TTACACGGAT
ACCGCACGGC GGCGCGTCGT CAGCCAATTG CTCGAGAAGA AGGAAGTGGA GAACGGCGAG
GTGACGTTGC GCCGCAAGGA CGGTTCACCG CTCATCCTCT GGTACAGTGC CGAATCCATC
CGGGACGCTT CGGGGTCGAT GGTCGCCTAC AGCGGTTATT TCCAGCAACG CCCCTTCGTG
TTCTCGTCCA AGCTTGCCAA CGACTTCGCA CGCATCGTCG ATGCCCTGCC AGGCGTGGCG
TGGGTGTGCG GACGCGACCT GCGCATCGTC GCCGTCAACG ACAGCTACCT CGAAGCCTAC
AACCGCAGCC GCAACGACGT CATTGGGCGC ACCGAGCATG ACTTTCTGCC TGCAGAACAG
GCTCGCTATC TGGTGGAGGC GGCGTTGCGA GTGTTCGAAG AGAAGCAGGA GTTGCTGCAC
CCGGCCGTAC CCCACCTGCT CGACCCCGCA GTATGGTTCC GCACGGTACG CCGCCCCATC
TTCGATGATG CCCGGCAAGA GGTCATCGGG TTGCTTGGCA TCGCACAGGA CATCTCCGGC
AAGGTGCGGC AGGAGAACGT ATTCATGGAG CAACTACGCG CGACGGAGTC CGACGTGGTG
GTGGTCACCG ACGACCAGGG ACGCATCCTG CGTCGATCAT TGCAGACCCT CTCGCCATCC
ATTTTCGGCA AGCGCGAACC CTTCGAGGCG TACACCCTCG ACATGCGCCC CGTTCTCGAC
CTGCTCGACG TCGACGACCT GCCCAAGGTG CGGCAGGCGC TCCATGCCGC CTTGCGTGAA
CATCGCGAAC AGCACATCGA ATGCCGGATT CGCAATCTGA CGGGTTCATA TACGACCGTA
CTCGCAAGAC TCGTATTCAA CGACACCATC TATGGCGAAC CACGGATGTA TGTCGTTGCC
CGCGACATCG GCGGCGAGAT GGAACTGCGC CAAGCCTCGA TGGTCATCGA ACGCCTGAAA
GAAGCCGCAA GAGCGAAAAC AGACAGGGAA CTGGCCCGCT TCCTCAATGT CTCTGCCGCG
TCCATTTCCA ACGCCCGCAA AAACGACCGG GTCCCCCCCG ACTGGATCAT CGATACAGGC
CTTCGCACAG GCCGTTCCAT CGACTGGCTC GTACGCGGCA TACTCTCTGA CATTCATTCG
GCCTGA
 
Protein sequence
MTLNELVDFY RPRLDASPDL GLLLDGHGNV LHANGPLRSL FDEGYTSAQP EGVARQLLDN 
MRTSERDTAA PVHETRLRMA LPDGAGIRQV DWKTLTIPAA EGRLLLAWGR LRTTEGGREM
GFTILPNGNI SAVSPMLSAI CGYAPDELIG RPARQFYYTD TARRRVVSQL LEKKEVENGE
VTLRRKDGSP LILWYSAESI RDASGSMVAY SGYFQQRPFV FSSKLANDFA RIVDALPGVA
WVCGRDLRIV AVNDSYLEAY NRSRNDVIGR TEHDFLPAEQ ARYLVEAALR VFEEKQELLH
PAVPHLLDPA VWFRTVRRPI FDDARQEVIG LLGIAQDISG KVRQENVFME QLRATESDVV
VVTDDQGRIL RRSLQTLSPS IFGKREPFEA YTLDMRPVLD LLDVDDLPKV RQALHAALRE
HREQHIECRI RNLTGSYTTV LARLVFNDTI YGEPRMYVVA RDIGGEMELR QASMVIERLK
EAARAKTDRE LARFLNVSAA SISNARKNDR VPPDWIIDTG LRTGRSIDWL VRGILSDIHS
A