Gene Dvul_1563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1563 
Symbol 
ID4664379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1853163 
End bp1854017 
Gene Length855 bp 
Protein Length284 aa 
Translation table11 
GC content61% 
IMG OID639819797 
Productpyruvate ferredoxin/flavodoxin oxidoreductase, beta subunit 
Protein accessionYP_967007 
Protein GI120602607 
COG category[C] Energy production and conversion 
COG ID[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit 
TIGRFAM ID[TIGR02177] 2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.284005 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCA CCATCGAATC TCTTGGGACG TTCGAGACCT CATGGTGCCC CGGATGCGGC 
AATCATGACA TCATGAAGGC CCTGCGGCAG GCCATCGTCG GACTGGGACT CGAAGCGCAC
AAGGTGGCGC ATGTCTCGGG CATAGGGCAG GCCGCGAAGG CGCCGCACTA TATCCGCCTC
AACGGCTTCA ACGGGCTGCA TGGTCGCAGT CTGCCCCCTG CGCAAGCCAT ACGTCTGTGC
AACAGCGAGC TCACCGTCAT TGCCCAGAGT GGTGACGGAT GCAATTACGG CGAAGGCGGC
AACCACTTCC TTGCCGCTAT CAGGCGGAAT GTGGATATGA CCTTGCTGGT GCACGACAAC
CAGATATACG GGCTCACGAA GGGACAAGCC AGCCCCACGA CCGGGGAGGG ACAAGTCACC
AAAAGCCAGC CCGGTGGGGT CACAAGTGCA CCGTTCAACC CTGTTGCCGT GGCTGTGGCC
ATGCGTTGCG GGTTCGTCGC CCGCTCGTTC TCCGGCAATG TCGAGCACTT GCAGGCCATG
ATCGAGGCGG CGGTGCGACA CCGGGGCTTT TCGCTGGTCG ACATCTTCTC GCCGTGCGTG
TCGTTCAACA AGGTGAATAC GTTCGGATGG TATCGGCAAC GATGCCGGGA GATTGACGCC
AGCCACGACC CTACGGACTG GAACGCTGCG ATGCGGATTG CCGACACCTT CGGGGACGTG
TTGCCCATAG GGGTCATCTA CAGGAATGAG CGTCCGCCAC TGGATGAACG CGTATCACAT
ATCGCAAAGG GGCCGCTGGG TCAGCAGGCG GTACGTCATG ACGTGCTGCG TGACATCATG
GCGTCGTATA TGTGA
 
Protein sequence
MTTTIESLGT FETSWCPGCG NHDIMKALRQ AIVGLGLEAH KVAHVSGIGQ AAKAPHYIRL 
NGFNGLHGRS LPPAQAIRLC NSELTVIAQS GDGCNYGEGG NHFLAAIRRN VDMTLLVHDN
QIYGLTKGQA SPTTGEGQVT KSQPGGVTSA PFNPVAVAVA MRCGFVARSF SGNVEHLQAM
IEAAVRHRGF SLVDIFSPCV SFNKVNTFGW YRQRCREIDA SHDPTDWNAA MRIADTFGDV
LPIGVIYRNE RPPLDERVSH IAKGPLGQQA VRHDVLRDIM ASYM