| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1553 |
|---|
| Symbol | |
|---|
| ID | 4662756 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 1843166 |
|---|
| End bp | 1843609 |
|---|
| Gene Length | 444 bp |
|---|
| Protein Length | 147 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639819786 |
|---|
| Product | RpiB/LacA/LacB family sugar-phosphate isomerase |
|---|
| Protein accession | YP_966997 |
|---|
| Protein GI | 120602597 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0698] Ribose 5-phosphate isomerase RpiB |
|---|
| TIGRFAM ID | [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family
[TIGR01120] ribose 5-phosphate isomerase B |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCA AAGTATTCGT CGGTTCGGAC CATGCGGGTT TCGCCCTCAA GCAGAGCATC
GTCGACAGTC TTCGCAACGC AGGACACGAC GTCGAAGACC TCGGCCCTGA AAGCGCCGTC
AGCTGCGACT ACCCGCACTA CGCCCAGAAA GTCTGCGACC GTGTTCTCGC CGAAGAGGCC
CTCGGCATCC TCATCTGTGG CACGGGAATC GGCATGTCGA TGGCTGCCAA CCGCATCCCC
GGCATCCGCG CGGCACTCTG CACCTGCGAA TTCCACGCCC GCGCCACGCG CCAGCACAAC
AACGCCAACG TCCTCTGTCT TGGCGAACGC GTGACGGGGC CCGGTGTGGC TCTTGAACTG
GCACGCCTCT TCCTTGACAC CGACTTCGAA GGCGGGCGCC ACCAGCGCCG CATCGACCTT
TTCGACCTCA ACGGTTGCCG CTAG
|
|---|
| Protein sequence | MARKVFVGSD HAGFALKQSI VDSLRNAGHD VEDLGPESAV SCDYPHYAQK VCDRVLAEEA
LGILICGTGI GMSMAANRIP GIRAALCTCE FHARATRQHN NANVLCLGER VTGPGVALEL
ARLFLDTDFE GGRHQRRIDL FDLNGCR
|
|---|
| |