| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1550 |
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| Symbol | |
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| ID | 4664476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | + |
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| Start bp | 1840263 |
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| End bp | 1841951 |
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| Gene Length | 1689 bp |
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| Protein Length | 562 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 639819783 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_966994 |
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| Protein GI | 120602594 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.119519 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCATCCT TCCGCCGTTC CGTTGCCGCC GTCGTCACCG CCCTGCCCCT CATCGCAGGT
GGATGCGCCC ATCGCCCCGC TGTCGAAACG GCCTCGCCAG AGGCCGTACA GTGGAACCTC
TCCGATGGTG CCGAAACGAC CTTCTACTAC CTCATGCTTG ATCAGGCGGC CCGCAGCGAC
AACACCCGCG ACGCCATCGA AGCCATCGAG AACCTCATCC GGCTGTCTCC CACGGCCCGT
GTCTACAACG ACTCCGGCAG CTTCCTGCTG TCACGCAAGG AGCCCGACCT CGCCCGTGAC
ATCCTCACGC GCGGCGTCGC AGCCCACCCG GACGACCTCG GCCTGACCCT GCTTCTCGCC
GAAAGCTACC TCGACCTCGA CCGCAACGAC GAGGCCATCG CCCTGCTGCG CGCCTATAAC
GCCAAGCACC CCAAGGACGA CGAGGCACGG CAGGAACTGG CACAACTTCT TGTGAAGACC
CGCCGTTACG AAGAGGCCGA CAAGCTCATC CTGTCCATCG GGGAGACCTC GCGCACGTCG
CTCCTGCGGT ACTACCACGC GCGCGCCCTC ATGGGGCTCA ACCGCCTCAC AGAGGCCACG
GCGCAACTCC GCAAGGCGGT CAAGGCATCT CCCGACTTCC TCGAGGCATG GGCCGAACTG
GCCTATGTGT ATGAGCTTCG CAAGAACTAC GTCGAAGCGG AAAAGATCTA CGAACAGATT
CTGGCTCTCG ACGAGGGCAA TCAGGACGTC TGGCTACGAC TGGTGGCCAT CAACATCAAG
CTCAACAACC CCGTCAAGGC CTATGAGCTG GCACGGCAAG GGCCGGAGAC CTTCGGCTTC
ATGCTCACGG CCGCAACGCT ATTCCTCGAT GACAGGTTCT TCGAACAGGC CGAAGGTCTG
CTTCTGGCCG TGAAGGATTC GCCCGGGGCT CCGGAAGAAG TCTACTTCTT CCTCGCCGTG
CTGGCCTACG AGGGACAGCG CGATACGGAC GCCACCCTGT CGTGGCTGCT AGAAGTGCGC
CCCACCAATA AGTACTACGA CCGCGCCCTG CGCCTGCGTA GCCAGCTGCT CTATGAGAAG
GGCGACCTCG AAGCGGCGCT GCGGACAGCC CGCGAAGGCC GTGAGACATT CCCCGAGCAA
AGGGACTTCC GCGAGATGGA GGCGCAACTT CTCGTCAACA TGGGGCGCTC CGAAGAGGCA
CTCCGGGTCA TCGATAAGGC CGCCGACCGC TGGCCCGATG ACAGCGGCCT GCTGTTCATG
CGCGCCCTCA TCCTCGACGA CAGGGGTGCG AAGGACGCTG CCTTCGCCGC CATGGAAGAG
GTCATCAAGG CCTCTCCCGA CCATGCACAG GCCCTGAACT ATGTGGGTTA CACCCTTGCG
GAACAGGAGC GCGACCTTAC CCGGGCCGTC TCCCTTCTCG AACGCGCCAA TACCCTTTCG
CCCGACAACC CCTTCATCCT CGACTCGCTG GCATGGGCCT ACTTCAAGGC GGGCCGCATG
CCCGAAGCAT GGAAGGCCAT CAGCCGCGCC ATCGAACTCA ATGCGCCCGA CCCCATCATC
TGGGAGCATT ACGGAGACAT CGCCACGGCC ATGGGGCAGA AGAACACGGC GCGGCGCGCC
TACCGCAAGG CCCTGTCCAT GAACCCGCAG AATCCCGACG CCATCAAGGC CAAACTCGAC
AAAAAATGA
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| Protein sequence | MPSFRRSVAA VVTALPLIAG GCAHRPAVET ASPEAVQWNL SDGAETTFYY LMLDQAARSD
NTRDAIEAIE NLIRLSPTAR VYNDSGSFLL SRKEPDLARD ILTRGVAAHP DDLGLTLLLA
ESYLDLDRND EAIALLRAYN AKHPKDDEAR QELAQLLVKT RRYEEADKLI LSIGETSRTS
LLRYYHARAL MGLNRLTEAT AQLRKAVKAS PDFLEAWAEL AYVYELRKNY VEAEKIYEQI
LALDEGNQDV WLRLVAINIK LNNPVKAYEL ARQGPETFGF MLTAATLFLD DRFFEQAEGL
LLAVKDSPGA PEEVYFFLAV LAYEGQRDTD ATLSWLLEVR PTNKYYDRAL RLRSQLLYEK
GDLEAALRTA REGRETFPEQ RDFREMEAQL LVNMGRSEEA LRVIDKAADR WPDDSGLLFM
RALILDDRGA KDAAFAAMEE VIKASPDHAQ ALNYVGYTLA EQERDLTRAV SLLERANTLS
PDNPFILDSL AWAYFKAGRM PEAWKAISRA IELNAPDPII WEHYGDIATA MGQKNTARRA
YRKALSMNPQ NPDAIKAKLD KK
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