Gene Dvul_1540 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1540 
Symbol 
ID4664336 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1828144 
End bp1830270 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content63% 
IMG OID639819773 
ProductCheA signal transduction histidine kinases 
Protein accessionYP_966984 
Protein GI120602584 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGTGC AGGATGAACT CAACCGTCAG GCGTTCGTCG AAGAGGCGCA AGACCTGCTG 
GCCGAACTTG AGACGGCGTT GCTTGAAATC GAGGAACGTC CCGAAGACAG GTCGCTCGTC
GACCGCATTT TCCGGGCCAT GCACACGATC AAGGGGTCGG GGGCGATGTT CGGCTTCGAC
GACATCGCGT CCTTCACCCA TGATGTGGAG AGTGTCTTCG ACAAGGTTCG CAATGGTGAG
ATGGAGTTGT CTCCGGAACT GCTCGATCTT ACGCTGAAGT CGCGTGACCA TATCGCCTAC
CTTCTGCAGT GTGCCACGAA AGGCCTCGCC GTCGACGTCT CCATGTCCGC CGACCTCACG
CAGGCTCTCC GGGCCCTGCT GCCGGGTGAT GACCACGCGT CCGCGTCCCC TGCCGATGAG
ATGCCGTCGT CCGGTGAGGT CGAAGGTCCC CGGCGGACCT ACCGTGTGCG CTTCAAGCCG
CATCCGCAAC TGTTCCTCTC GGGCACGAAC CCTCTGGGGC TGGTGCGCGA GATACAGGAC
CTGGGGCGTT CGAAGCTCTT CGTCCATTTC GGTGACGTGC CAGCCCTCGA TGAACTCGAC
CCGGAGCAAT GCCATGTGTG GTGGGATGTG TTGCTCACCA CCGATAGTGA TGAAGCCGCC
ATCCGTGACA TCTTCCTCTT TGTCGAGGAC GATGCGACCG TTGATGTGCG GCTCATCGAC
GAGGCGAACC TGCTTGAACA GGACGGTGCC TACAAGCGGC TTGGCGAGAT TCTGCTTGAA
CGGGGCGATG TGGCGACCGA AGACCTGCGG CGGGTGCTGG AGGAGCAGCG TCCCATTGGC
GAACTGCTCG CCGAGGCAGG CATCGTCACC CCTGATCAGG TCGCTTCCGC GCTGGCGGAG
CAGAAGACGG TGCGCGAACT GCGCCGCAGC CGCACCGAAG ACGGGGACAA GCCCGCCGAA
AAGGCGGGAG ACGCCGGGGC GAGCATTCGC GTCTCTGCTG CCAAGCTCGA CTATCTAGTC
GATCTCGTAG GTGAACTTGT CATCGTGCAG TCCCAGATAG CGCGTATGGC GCACGAGCAT
CCCGCCCCCG GCATGTTGAG CCTCGTCGAA GCCCTCGAAA GGCTCAGCGA CGACCTGCGC
GACACGACGC TGGGTGTGCG CATGCTGCCC ATAGGAACCA CGTTCAGCCG TTTCAGACGG
CTGGTGCGCG ACCTCGCCGG AGAATTGGGC AAGAGCGTCG AACTCGTCAC GCTCGGAGGC
GAGACGGAAC TGGACAAGAC CGTCATAGAG CGACTGGGCG ACCCGCTGGT GCATTGCCTG
CGCAACAGCC TCGACCATGG TGTGGAATCG CCGGAACGCC GTCTGGCAGC CGGGAAGAGC
GCCACGGGGC GCATCACGCT GGCAGCCGCT CACGCTGGCG GCGAGGTGCT GGTGACCATT
TCGGATGATG GTGCGGGCAT CGATGCCGAA AGAATCTATC AGGCTGCCCT GCGCAAGGGC
ATCATTGCCC CCGAGGTAGA CCTTTCCACC CGGCAGAAGC TGGAACTCAT CTTCGCGGCA
GGCTTCTCCA CTGCGGAGAA GGTGACCAAC GTCTCGGGGC GCGGCGTCGG CATGGATGTG
GTGAAGCGAG CCATCGAGAG CCTGCGCGGG CGTATCGAAC TGGAGAGCAC GCCGGGCAAG
GGGACAGTCA TCACCATACG GCTGCCGCTC ACGCTTGCCA TCATCGACGG GCTTCAGGTT
CGCGTGGGGG ACGAGTCCTA CATCATTCCG TTGCCCCATG TGGAAGAGTG CGCCGAACAC
AATACGCCCG ACCATGTCGA CGGGCGACAG CGCATCATCA ACCTGCGGGG TGACATCGTG
CCGTTCATAC GCTTGCGCGA TGTCTTCCGG GTTCCGGGTG TCTCTCCGGG CATGGAACAG
CTTGTGGTGG TGAACGCGCT CGGAAGCCGA TTCGGGCTGG TTGTCGACTG CGTCATCGGA
GAGCACCAGA CGGTCATCAA GAGTCTTGGC AAGGTCTACA AGGACATTCC GGGCATTTCC
GGCGCGACCA TTCAGGGGGA CGGCAGCATG GCACTGATCA TCGACGTGCC GGGACTCGTC
CATACCGCAG CGCTTGAGGC CGCATGA
 
Protein sequence
MIVQDELNRQ AFVEEAQDLL AELETALLEI EERPEDRSLV DRIFRAMHTI KGSGAMFGFD 
DIASFTHDVE SVFDKVRNGE MELSPELLDL TLKSRDHIAY LLQCATKGLA VDVSMSADLT
QALRALLPGD DHASASPADE MPSSGEVEGP RRTYRVRFKP HPQLFLSGTN PLGLVREIQD
LGRSKLFVHF GDVPALDELD PEQCHVWWDV LLTTDSDEAA IRDIFLFVED DATVDVRLID
EANLLEQDGA YKRLGEILLE RGDVATEDLR RVLEEQRPIG ELLAEAGIVT PDQVASALAE
QKTVRELRRS RTEDGDKPAE KAGDAGASIR VSAAKLDYLV DLVGELVIVQ SQIARMAHEH
PAPGMLSLVE ALERLSDDLR DTTLGVRMLP IGTTFSRFRR LVRDLAGELG KSVELVTLGG
ETELDKTVIE RLGDPLVHCL RNSLDHGVES PERRLAAGKS ATGRITLAAA HAGGEVLVTI
SDDGAGIDAE RIYQAALRKG IIAPEVDLST RQKLELIFAA GFSTAEKVTN VSGRGVGMDV
VKRAIESLRG RIELESTPGK GTVITIRLPL TLAIIDGLQV RVGDESYIIP LPHVEECAEH
NTPDHVDGRQ RIINLRGDIV PFIRLRDVFR VPGVSPGMEQ LVVVNALGSR FGLVVDCVIG
EHQTVIKSLG KVYKDIPGIS GATIQGDGSM ALIIDVPGLV HTAALEAA