| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1526 |
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| Symbol | |
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| ID | 4664583 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1813383 |
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| End bp | 1815776 |
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| Gene Length | 2394 bp |
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| Protein Length | 797 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639819759 |
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| Product | DNA ligase, NAD-dependent |
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| Protein accession | YP_966970 |
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| Protein GI | 120602570 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0272] NAD-dependent DNA ligase (contains BRCT domain type II) |
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| TIGRFAM ID | [TIGR00575] DNA ligase, NAD-dependent |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0626416 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.309916 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAG TGAAGAAGGG CCGCGTTGTC GACGATGCCC CTGTGAACGA TGCCCCTGAG
AACGATGCCG CGGAAGTGAC GTCTCCCGCC CGGCATGACG CGATTCCCGA AGAGGCCCGC
CAGCGCGCCG CACAACTTCG GGCAGACCTT GAGCGGCATA ACCGCCTCTA CTACGAACTT
GATACGCCCG AGATAAGCGA CGCCGAATAC GACGTCCTAT ATCGTGAACT CGTGGGCCTT
GAAAGGCGCT GGCCCGCATT GCGGGACGAG GCCTCGCCCA CGCAGAGGGT CGGCGGTGAA
GTGCTCGAAG GGCTTGAGAA ACAGGCCCAC ACCCTGCGCA TGTACAGCCT CGACAACGCC
TTCTCCCGCG ACGAATGGGG GGCCTTCATG CAGCGCATGT ACAACGCCCT TCCTGACGCC
CCTTCGGCCT TCTGGTGCGA CCCCAAGATG GACGGCCTCG CGCTGGAGGT CATCTACGAG
AATGGCGTCT TCACTTCGGC GTTGACACGG GGCAACGGTG AAGTGGGCGA GGTCGTCACC
GCCGCTATGC GGACGGTGCG CAACCTGCCC CTTGCCCTGC GCGGAGACGA CGTGCCGCGC
CGTATCGAGG TGCGCGGCGA AGTGGTCATC GCAAAGGCCG ACTTCGAACA ACTCAACGCG
CGGCAATCTG CCGCCGGGGG CAAGCTTTTC GCCAACCCGC GCAATGCGGC GGCGGGGTCG
GTGCGACAAC TCGATACAAC CGTCACCGCC GGAAGGCCCT TGCAGTTTCT CGCCTATGGC
GTGGGACAGG TGGTCCTCGA AGGCGGCACC GCGCCGTGGA CGACCCATAG CGGCCTCATG
GCAAGGCTTC GTGAATGGGG GTTCGATACG CCGCCGGAGG GCCGTCTGTG TGCTTCGCCG
GACGAGGTGT GGGCATACTA CGAGGCGCTT GGCGCACGTC GAGAGTCGCT TGCCATCGAG
ATAGACGGGG TCGTCGCGAA GCTTGATGAC ACCGAGGCGC AGGAAGCCCT CGGTTTCACG
GCGCGTGCCC CACGGTGGGC ACTGGCCCTC AAGTTTCCTG CGATGCAGGC GCGTACGCGT
CTCGATGACA TCCGTGTGCA AGTGGGGCGC ACCGGGGTGC TTACACCGGT GGCGATACTC
GAACCCGTGC GCGTGGGCGG TGTAGAGGTC TCGCGCGCAA CGCTTCACAA CGAGGACGAG
ATTCGCGCCA AGGGACTGAT GCTGGGCGAC ATGGTGCTGG TACAACGCGC TGGCGATGTC
ATCCCCGAGG TGGTGCGCCC ACTGGTCGAA GAACGCACTG GTGACGAACG GCCCTTCGTC
TTTCCGGAAA ACTGTCCGGA ATGCGATAGC CCTGTGGTCA GACCCCAAGG CGAGGTGGCG
CACCGGTGCG TCAATGTCAT GTGTCCTGCG GTGCGCAGGC AGTCCATCAT CCATTTCGTC
TCCAAGGCGG GCCTCGATGT GCGCGGCGTG GGTGAACGAT GGGTGCAGCA GCTTGTGGAC
GGCGGGCATG TGACCTCACC CGTCGGGCTT TTCTCTCTGA CCAAGCTCGA CCTGATGCGT
TTCGAGCGCA TGGGGCCTAC TTCGGCCGCC AATTTCGTCA CCGCGCTCGA TGCCGCCCGC
ACAGGGGCGA CGCTTGTCCG GCTCATCTGC GCCCTCGGCA TCCGTCATGT GGGTGAACAG
ACGGCACGTA CCCTTGCCGC GAACTTCACC GACCTTGACG CCCTGCGTGA GGCCGACGCC
GAGACCTTGC AGCAGTTGCC CGACATCGGC CCTGAAGTGG CAGGTTCCAT TCGCACCTTC
TTCGCCAACG AGGGCAATCT CGAACTGCTT GAACGGTTGC GTGCCATCGG CCTCTGGCCG
AAACGGCAGG ATGCTCCGCC GGCTCCGGAG GGCGCTGACG CCATCGTACG CCCCCTGCAA
GGACTGAAGG TGCTCTTCAC CGGAAGCCTC ACCCGTGTGG GACGCACCGA GGCCGAAGAT
ATGGCGCGGG CTGCGGGGGC CAATATCGCC AGCAGCGTCA CCAAGTCTCT TGACCTTCTT
GTCGTCGGCG GTAAGCCCGG TTCGAAACTC GAAAAGGCCC GAAAGCTTGG CATCCGGGTC
ATGGAAGAGG CGGATTTCTT CGCCATGCTC GAATCGGCGG AGATGCCTGC TGAAGGCTCC
GATGCCGCCG AAGTGCCTGC TCCCTCTGTG GAAGACGTGG ACGCAAAGGA AGTTCCTTCC
CGGGATGTGG CCCATGTCCG CATAGTCCAC GACGGAACGG CTTCCGACCC GGGTGGTGAC
TCGCGCAGTG TGGCGGAGGA CGCTCCCGCC CGTTCCACAG AGGGGGATGC CGTGAGCACC
GCTGAAGGTG AAGACGTGCC ACGGGGCAGG GCAGAGCAAC TGAAGCTGTT CTGA
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| Protein sequence | MTEVKKGRVV DDAPVNDAPE NDAAEVTSPA RHDAIPEEAR QRAAQLRADL ERHNRLYYEL
DTPEISDAEY DVLYRELVGL ERRWPALRDE ASPTQRVGGE VLEGLEKQAH TLRMYSLDNA
FSRDEWGAFM QRMYNALPDA PSAFWCDPKM DGLALEVIYE NGVFTSALTR GNGEVGEVVT
AAMRTVRNLP LALRGDDVPR RIEVRGEVVI AKADFEQLNA RQSAAGGKLF ANPRNAAAGS
VRQLDTTVTA GRPLQFLAYG VGQVVLEGGT APWTTHSGLM ARLREWGFDT PPEGRLCASP
DEVWAYYEAL GARRESLAIE IDGVVAKLDD TEAQEALGFT ARAPRWALAL KFPAMQARTR
LDDIRVQVGR TGVLTPVAIL EPVRVGGVEV SRATLHNEDE IRAKGLMLGD MVLVQRAGDV
IPEVVRPLVE ERTGDERPFV FPENCPECDS PVVRPQGEVA HRCVNVMCPA VRRQSIIHFV
SKAGLDVRGV GERWVQQLVD GGHVTSPVGL FSLTKLDLMR FERMGPTSAA NFVTALDAAR
TGATLVRLIC ALGIRHVGEQ TARTLAANFT DLDALREADA ETLQQLPDIG PEVAGSIRTF
FANEGNLELL ERLRAIGLWP KRQDAPPAPE GADAIVRPLQ GLKVLFTGSL TRVGRTEAED
MARAAGANIA SSVTKSLDLL VVGGKPGSKL EKARKLGIRV MEEADFFAML ESAEMPAEGS
DAAEVPAPSV EDVDAKEVPS RDVAHVRIVH DGTASDPGGD SRSVAEDAPA RSTEGDAVST
AEGEDVPRGR AEQLKLF
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