Gene Dvul_1510 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1510 
Symbol 
ID4662119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1796632 
End bp1797453 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content64% 
IMG OID639819743 
Product2-dehydro-3-deoxyphosphooctonate aldolase 
Protein accessionYP_966954 
Protein GI120602554 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2877] 3-deoxy-D-manno-octulosonic acid (KDO) 8-phosphate synthase 
TIGRFAM ID[TIGR01362] 3-deoxy-8-phosphooctulonate synthase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0743191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0006331 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCAACATC CCACCCCCGA TGCCCTCCAC GCCCGTCTCG CCGCAAGGCG CTTCATTCTT 
GCAGGCCCGT GCGCCCTTGA AGACTTCGAC GTCGCCATGG AGACAGCCCA TGCCGTGCGT
GAGGCTGCCG AGGCCGCCGG GCTTTTCGCC GTCTTCAAAA GCTCGTGGGA CAAGGCCAAC
CGTACTTCCA TCACCAGTTT CCGTGGCCCC GGTCTTGTGA GGGGCATGGA GTGGCTGGCC
CGAATCCGTG AAGAGAGCGG TCTGCCTGTC GTCACGGACA TCCATCTTCC CGAACAGGCT
GCACCTGTCG CCGAAGTCGC CGACATCATC CAAATACCGG CCTTCCTCTG TCGCCAGACG
GACCTGCTTG TCGCCGCTGC CGCCACCGGG CGTGTGGTGA ACGTCAAGAA AGGGCAGTTC
GTCGCGCCAT GGGACATGAG GCCCGCCGTG GAGAAGCTCC GTGCCGCAGG CAATGAACGC
ATTCTGCTGA CCGAGCGCGG CACCAGTTTC GGGTACAACA ACCTTGTCGT CGACTACCGG
TCCATCCCCA CCATGCAAGG GTTCGGCGTG CCAGTGGTAT TCGATGCCAC CCATTCGGTG
CAGCTTCCCG GTGGTCTGGG CGGTTCCTCG GGTGGCGAAC GTCGTCATGT ACCCGTGCTC
GCGCGGGCTG CCGTGGCAGC AGGGGTCGAT GGCGTGTTCC TCGAGTGCCA CCCCGACCCC
GACAAGGCGT TGTGCGACGG CCCCAACAGC TGGCCTCTTG ACAGGCTGCC CGCCCTGTTG
AAGGAACTTT CGGCCCTCTG GAGCCTCGAA CATGTCTGTT GA
 
Protein sequence
MQHPTPDALH ARLAARRFIL AGPCALEDFD VAMETAHAVR EAAEAAGLFA VFKSSWDKAN 
RTSITSFRGP GLVRGMEWLA RIREESGLPV VTDIHLPEQA APVAEVADII QIPAFLCRQT
DLLVAAAATG RVVNVKKGQF VAPWDMRPAV EKLRAAGNER ILLTERGTSF GYNNLVVDYR
SIPTMQGFGV PVVFDATHSV QLPGGLGGSS GGERRHVPVL ARAAVAAGVD GVFLECHPDP
DKALCDGPNS WPLDRLPALL KELSALWSLE HVC