| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1423 |
|---|
| Symbol | engB |
|---|
| ID | 4664500 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfovibrio vulgaris DP4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008751 |
|---|
| Strand | + |
|---|
| Start bp | 1723693 |
|---|
| End bp | 1724343 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639819655 |
|---|
| Product | ribosome biogenesis GTP-binding protein YsxC |
|---|
| Protein accession | YP_966868 |
|---|
| Protein GI | 120602468 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0218] Predicted GTPase |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.192754 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATCGA CCCTTGTGCT TGAAACCACA GCCTATACGC TGGAACAACT CATACATCTG
GACGCGCCAC AGATAGCCCT TGCCGGACGA TCCAATGTCG GCAAGTCGTC ACTCGTCAAC
GCTCTTGCCC GTCGCAAACA ACTGGCGAAG ACGAGTTCGA CACCTGGCAA GACCCGCAGC
GTCAACTACT ACAGAGTCGA ACCGGAAGGA TTCTACATCG TAGACCTTCC GGGATACGGC
TATGCCCAGT GCAGCAAGGA AGAACGCAAA AAGTGGGCAA AGCTCATCGA GAAGTACATC
GTCTCATGCA AGAGCCTGCG GGGTCTTGCC GTACTTCTCG ATTGCCGTCT CGACCCGCAA
CGGCTGGATG TCGACCTCAC CAGCTACGCC CGTGCCAACA ACATTCCGTT GCTGCCCGTG
CTGACCAAGG GTGACAAGTG CAAGCTGCGT GAACGTTCCG ACAGGCAGAA GCAGTGGGCG
GTGCTTCTGG GGGGCAGAAA GCCCCTCGTC ACCGCGTCCA TGACGGGGCT CGGCATCGCC
GACCTGTGGC GCGAACTGCG TGCCCTTGCC GCTGGCGGAC TATCTGCCGA CGACGAAGCG
GAAGATGCCC CTTCGGACAC CATTGATGCC ATCGACGACG TGACAGCATA G
|
|---|
| Protein sequence | MSSTLVLETT AYTLEQLIHL DAPQIALAGR SNVGKSSLVN ALARRKQLAK TSSTPGKTRS
VNYYRVEPEG FYIVDLPGYG YAQCSKEERK KWAKLIEKYI VSCKSLRGLA VLLDCRLDPQ
RLDVDLTSYA RANNIPLLPV LTKGDKCKLR ERSDRQKQWA VLLGGRKPLV TASMTGLGIA
DLWRELRALA AGGLSADDEA EDAPSDTIDA IDDVTA
|
|---|
| |