| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dvul_1416 |
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| Symbol | |
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| ID | 4664460 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfovibrio vulgaris DP4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008751 |
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| Strand | - |
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| Start bp | 1715718 |
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| End bp | 1717523 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639819648 |
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| Product | ABC transporter related |
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| Protein accession | YP_966861 |
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| Protein GI | 120602461 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.218265 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGAAC CTTCGACAAC GCAAAGGGCA AGCCTGCCCC TGTTGCGCCG CATCGGCCGT
TATTTTCTCC CTCACAAGGT TTCGATCGCC CTTTCCATGG GCTGCATGGC TATCGTTTCT
GCCACCACTG CGGGAACCGC CTACCTGATC AAGCCCGCTC TTGACGACAT CTTCATCAAC
AAGGATGAGC AGGCGCTCTT GCTTGTGCCG GCCTTTTTCA TCGTGCTCAC CGCGCTCAAG
GGCTTCGGCA GATATTTCCA GAACTACTTC ATGAACTACG CTGGCTTGCG TGTCATTGAA
AGCCTGCGGG ATCAGCTCTT CACCAAGATC ATCCACTTGC CGATGCGATT CTACGAGGAT
TCGCAGATCG GCTTGCTCAT GTCGCGCATC ATCAACGACG TATCCATGAT CCGCGACAGC
CTGCCGTCGA CCGTCATGAT CGTCCGGCAG ATACTGACCA TGGTGGGGCT CATCGGCGTG
GTCTTCTACC AGAACGCCGA ACTGGCCACA TGGGCGGTTC TCGTGTTGCC GCTGGCTCTC
TATCCGTTCA TCTACTTCGG GCGCAAGCTG CGCAAGCTGG GACGACGCAA TCAGGAGAAG
CTGGCCGACA TTTCCGTCAT CCTTCAGGAG GTGTTCAGCG GCATCCGGGT TGTGAAGGCT
TTCGCCACCG AAAAGGAAGA AGCCCATCGC TTCGATGCCG AGAACCAGAG ACTCGTGAAG
CTCACCCTCA AGCAGATTTG CGTCTCTGAG CTTTCATCTC CTGTCATGGA ACTCATAGGC
GCTCTCGGCA TCGGTCTCGT CATCCTTTAC GGAGGACATG AAGTCATATC CGGCAAGACC
ACGCCCGGTA CGTTCTTCTC GTTCATGGCT GCACTGGTCA TGCTCTACGA CCCCATCAAA
TCGCTGAGCA TGGCCAACCG CGAGGTGCAA CGTGCCCTTG TCGGGGCTGA ACGTGTCTTT
GAAATCCTCG ATGCAGAGGA CCTTTGCATC GAAACCTCGG GTGACCTGAA GTTCAACCGC
GACTTCAAGG AAGTGTGCAT CAAGGATGTG AGCTTCGCCT ATGCCGACGG GTCGCCAGCC
CTGAGGGACA TCAACCTGTG CGTTCGTGCA GGAGAACGGG TGGCCATCGT CGGGCCAAGC
GGCGCCGGCA AGACCACACT GGTGAACCTC ATCCCCCGTT TCTATGAACC CTCATCGGGA
TGCATCGAGA TTGACGGGGT ACCGTTGCAG GACTTCGACC TTGCCGACCT CAGGCGTTCG
ATATCCGTGG TGTCGCAGGA CGCTTTTCTC TTCAACCTGA GCGTCTCGGA CAACATCACC
TACGGCACGC CGAATGTCGG CGCCGGACGG ATAGAGGCCG CAGCACATGC GGCGTTCGCT
CACGAGTTCG TACAACAACT CGCCCAAGGG TACGATACCG TCCTCGGTGA ACGGGGCGTC
AAACTCTCCG GCGGCCAGAA GCAACGGCTC ACCATCGCCC GGGCACTTCT CAAGGACGCA
CCGCTCCTTA TACTTGATGA AGCGACCAGT GCACTCGACT CGCAAGCCGA GCGTATCGTG
CAGAAGGCTC TCGACAATCT GATGGAGAAC AGGACGAGCA TCGTCATCGC GCACCGTCTT
TCCACGGTGC TCAATGCCGA CCGCATCGTA GTCATGGAAG ACGGTCGCGT CGTCGACCAG
GGCCCTCATG CCGAGCTTCT CGGCCGGTGC GAGCTTTATA CTCGACTGTA TTCCATTCAG
TTCGGGCAGG AGAAGGCCGA CGCAGACCGG ACAGACGGAA CCTCCGAAGA GAAGCTTGAA
GCATGA
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| Protein sequence | MGEPSTTQRA SLPLLRRIGR YFLPHKVSIA LSMGCMAIVS ATTAGTAYLI KPALDDIFIN
KDEQALLLVP AFFIVLTALK GFGRYFQNYF MNYAGLRVIE SLRDQLFTKI IHLPMRFYED
SQIGLLMSRI INDVSMIRDS LPSTVMIVRQ ILTMVGLIGV VFYQNAELAT WAVLVLPLAL
YPFIYFGRKL RKLGRRNQEK LADISVILQE VFSGIRVVKA FATEKEEAHR FDAENQRLVK
LTLKQICVSE LSSPVMELIG ALGIGLVILY GGHEVISGKT TPGTFFSFMA ALVMLYDPIK
SLSMANREVQ RALVGAERVF EILDAEDLCI ETSGDLKFNR DFKEVCIKDV SFAYADGSPA
LRDINLCVRA GERVAIVGPS GAGKTTLVNL IPRFYEPSSG CIEIDGVPLQ DFDLADLRRS
ISVVSQDAFL FNLSVSDNIT YGTPNVGAGR IEAAAHAAFA HEFVQQLAQG YDTVLGERGV
KLSGGQKQRL TIARALLKDA PLLILDEATS ALDSQAERIV QKALDNLMEN RTSIVIAHRL
STVLNADRIV VMEDGRVVDQ GPHAELLGRC ELYTRLYSIQ FGQEKADADR TDGTSEEKLE
A
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