Gene Dvul_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1383 
Symbol 
ID4664835 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1682154 
End bp1684175 
Gene Length2022 bp 
Protein Length673 aa 
Translation table11 
GC content63% 
IMG OID639819613 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_966828 
Protein GI120602428 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACGTG TCATCTACGG AATCTGGGAC GGTACCGTCC ACGACAACAG GGGAAAGGCG 
CTTTTCGAGA TACCGGATGC GCCGGGGTTC GAAGGGTTCG ATACGTTCAA TCAGGGCAAC
TCCATTCGCG CCTTTGTCGG AGATAGAGGG TTCTTCGTCT TCGAACCGGG TGTGAATCTG
CTCGATGCCT TGTGGCAGTA TATGGAAAGG GCCGCCCGCG AGTCATGCGG CAAGTGTACG
CCATGCCGTG TCGGCACGGG TATCATCCGC GACAGCCTCG CCGCCCTGCT GCGTGATGGT
GTCGGTTCTG GCGGTCTGGG CACTTTGGTC GAACTCGCTG AACAGGTACG CTCTACTTCA
TTGTGCGGCC TCGGGCGCAC GTGCACTGTG GCACTGTGCG GCGCGCTTGA GCACTTTCAG
GATATGCTCG TTGAAGGGGC GCGCACGGCG AGCGGACAGC AGCACGGCAT GAGCTATGTC
ACGGCACCGT GCATCGAAGC CTGTCCCGCC AGAGTGAATG TCCCCCGCTA TATCGATTAC
ATACGTGACG GCATGCCCTC GCATTCGCTC GGGGTCATCC TGCAGAAGTA TCCCATGGCG
GCGACCTGTG GCCGTGTGTG CGTGCGGTTC TGCGAACAGG CATGCCGACG CGGGCTGGTC
GATGAGCCCG TTGGCATCAA GATTCTCAAA CGCTACGTCG CCGACCATGA GAGTCACCTT
GCGCAGGGCT GGTTCTCTCC TGATATCGTA CGTGACAGAA AACCCGATCA CCTGAAGGTT
GCGGTGGTGG GTGCCGGGCC AGCAGGCATA TCCTGCGCCT ATCACCTGCT TCTCAACGGC
TACCCCGTCG ACGTGTTCGA GGCCCGCAAC GAGGCGGGGG GCATGGCTGC GTGCGGCATT
CCCAGTTACA GGTTGCCCAA GGATGTCCTC CGTACGGAGA CCGACATCGT CGAACGTCTC
GGAGGGCGGT TCTTCTATGG ACAGCGTCTC GGGCACGATG TCTCGCTCGA TGGACTCCGT
GAGCAGGGAT ACAAGGCCGT GTTTCTCGCC CTTGGTTGCC CGGAAGGACG CCTTCTGGGC
ATTGAGGGGG AGGATACATC GCTTGAAGGA TACCAGCCCG GCATCGACTT TCTCTTGCGA
GTGCACGACC ATGTCGAATC GCAAGCCGAC GCTTCGCTGT CAGGGGTGGT CGTGGTCGTG
GGGGGCGGCA ACGTCGCCAT GGACTGTGTC CGTTCCGCAT TGCGCCTCGG CGCACGTGAG
GTGCACCTTG TCTACCGTCG CACACGCGAC GCCATGCCTG CCGACCATGA GGAGATAGAG
GCCGCAGAGA AGGAGGGCGT GGTCTTCCAC TTCCTCACCA ACCCGGTGCG CATCATCACC
AGACAGATGG TGGACTCCGC AGGCGTGACC CGTGACCGTG TCGTCGGTGT CGAGGTCGTG
GACATGCGCG AGGGCGAGCC CGATGCGCGA GGAAGGCGCG GCGTCGTCGC GGTGTCGGGG
TCGGGGCGCG TCATACCCTG CGATACCCTC ATCCCCGCCA TCGGCCAGCA GATGGACAGC
ACCGCGCTTT CGCCGGAGGA CGGCGTCGAT GTCGACGCGC GAGGTCGCGT CGTCTCCGAC
CAGACCACTC TCGCCACGAC GCGGCCCGGT GTCTTTGCCG GGGGCGACTG CGCCTTGGGC
CCCTCAACGC TCATCCAGGC CATGGCGACC GGCCTCAAGG GGGCGCGGAG CATCGACGAC
TATCTGCGCT ACGGCAGGGT CCGCTTCTTT CCCAGAAGCC GGATGCGCCG TATCATCCGT
GATTTCAAAC CGCTGTCGCA ACAGTGGGTC GATACTCCGG TTCGTCATCT GTACCGCATC
CATGCACAGG AACTCGACCC CGCCTACCGC AGGCAGTTGT TCGACGAGGT GGAATGTCCC
ATCTCCGCAG AGGACGCCTA TCACGAGGCC GGACGCTGTC TGCGTTGCTA CCGCGTCTAT
TCTGTCATCA CCGAGGCCGC CATCCCGCAG TGCGACGACT GA
 
Protein sequence
MARVIYGIWD GTVHDNRGKA LFEIPDAPGF EGFDTFNQGN SIRAFVGDRG FFVFEPGVNL 
LDALWQYMER AARESCGKCT PCRVGTGIIR DSLAALLRDG VGSGGLGTLV ELAEQVRSTS
LCGLGRTCTV ALCGALEHFQ DMLVEGARTA SGQQHGMSYV TAPCIEACPA RVNVPRYIDY
IRDGMPSHSL GVILQKYPMA ATCGRVCVRF CEQACRRGLV DEPVGIKILK RYVADHESHL
AQGWFSPDIV RDRKPDHLKV AVVGAGPAGI SCAYHLLLNG YPVDVFEARN EAGGMAACGI
PSYRLPKDVL RTETDIVERL GGRFFYGQRL GHDVSLDGLR EQGYKAVFLA LGCPEGRLLG
IEGEDTSLEG YQPGIDFLLR VHDHVESQAD ASLSGVVVVV GGGNVAMDCV RSALRLGARE
VHLVYRRTRD AMPADHEEIE AAEKEGVVFH FLTNPVRIIT RQMVDSAGVT RDRVVGVEVV
DMREGEPDAR GRRGVVAVSG SGRVIPCDTL IPAIGQQMDS TALSPEDGVD VDARGRVVSD
QTTLATTRPG VFAGGDCALG PSTLIQAMAT GLKGARSIDD YLRYGRVRFF PRSRMRRIIR
DFKPLSQQWV DTPVRHLYRI HAQELDPAYR RQLFDEVECP ISAEDAYHEA GRCLRCYRVY
SVITEAAIPQ CDD