Gene Dvul_1355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1355 
Symbol 
ID4664664 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1650492 
End bp1651955 
Gene Length1464 bp 
Protein Length487 aa 
Translation table11 
GC content62% 
IMG OID639819585 
Productdiguanylate cyclase 
Protein accessionYP_966800 
Protein GI120602400 
COG category[T] Signal transduction mechanisms 
COG ID[COG2199] FOG: GGDEF domain 
TIGRFAM ID[TIGR00254] diguanylate cyclase (GGDEF) domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.133394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.478971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCACC AGCACCTCAT GTGGAACATC GGCCTCAGCG ACCTCGACGC GGCCCGCATC 
AGCGAGTTCG CAGGCGCAGG CTACACCATG CAGACCGTCC CTGCCGACGC CCTGCCAAGC
CCGGACGACC TCGAACGCGA GGCGCCATGC ATCATATGGG TGGCGGCGTC TGTACAGGCG
GCCCTTGCCG CACATCCACG CCAACTGCGC CAGCATCTCG AACTCGTGCC GCGAGCGCTT
GTTCTCGACG TCAGCTACAC GCAAAACGAC CTCGAACAGG CTCTCGACCT CGACTTCTCG
GAAATCGTAC GCCATCCCAT CTCGCGCAAG CGAGTGCTCA CCGTGTTGCG CCGTGCCGTC
GAGACCCGCA ATGTTCATCA GGACATTCTG CGCATGACGA GGGAGATTCT CCTCGAACGC
GAATTGCTCG CACGGAAGAA CGACCTGCTC TCCTTTGTCG TCACTTTTCT GACAAGAACG
ACAGAGAGCC TCGACATCGC AGACATTCTC ATCAACGCTC GCGAAGGATT CGGCAAACTC
CTGCCCGTGA CGGGTCTTCA TGCCATTCTG TGGCCGCCCT CGCCCACGGA GGGCGCACAT
GACGCCGAAC TCTTCATCGG CGCCTACAGG CAGACAGAAG CCCATGCGGC ATGGACACGC
CTGCTTCTGG AGTCTGCACA CAGACTCGCC CGACACGACG TGGCAGAATA CCGCACGACG
GCATTGACGC ACGACGAACC GTCGCCCCTG CCCGAAGCAG GACGAGTGAT GATGCTGCCC
CTTGGCAACG GCAAGAACAC CTTCGGGGCC ATAGCCATGG CTCTCGCCGA GACACCGGCG
CTGGGCAAGG ACCAGGCACA GGCCCTCGAC TCTGTCATGC GTCACCTCAC GCTCGCGCTC
CGCAATGCCG TCGTATACCG TGAAATCAAG CTTCAGGCCG ACCATGACGC GCTCACGCAG
TTGCACAACA GGCGCAGCTT CGATCATCGG CTGGCCGAAG AAGTCGACCG CCATCAGCGT
TACGGGATGC CCATGACGCT GCTCATGCTC GACATCGACC ATTTCAAGGC CGTCAACGAC
ACCTACGGAC ACCCGGCAGG AGATGCCGTC CTGCGCGAAG TCGCGCAGAC CATGCGTAAC
GCCTGTCGCA CGACAGACTT CGCGGCCCGC TACGGCGGCG AAGAGTTCTG CGTCATCCTT
CCGCATACCG ACGGCAAATG CGGACGCATC TTTGCCGAAC GGTTACGCAA ACGCCTCGCT
TCCAGCAGGG TCGAAGTGGA CGGCAAGACC ATCGCCGTCA CAGTGAGCAT AGGCCTTGCC
ACGCTTTCCG CGGCAGCACC GCTCTCCCCG GAAAGGCTCG TCTGTGAAGC GGATGGAGCC
CTCTACGCAG CCAAGGCCGC CGGGCGCAAC ATCGTCTGCG AGGCGCAGGA ACCCTGCCAG
AGAGCGAATG CGTTACGCGC GTGA
 
Protein sequence
MKHQHLMWNI GLSDLDAARI SEFAGAGYTM QTVPADALPS PDDLEREAPC IIWVAASVQA 
ALAAHPRQLR QHLELVPRAL VLDVSYTQND LEQALDLDFS EIVRHPISRK RVLTVLRRAV
ETRNVHQDIL RMTREILLER ELLARKNDLL SFVVTFLTRT TESLDIADIL INAREGFGKL
LPVTGLHAIL WPPSPTEGAH DAELFIGAYR QTEAHAAWTR LLLESAHRLA RHDVAEYRTT
ALTHDEPSPL PEAGRVMMLP LGNGKNTFGA IAMALAETPA LGKDQAQALD SVMRHLTLAL
RNAVVYREIK LQADHDALTQ LHNRRSFDHR LAEEVDRHQR YGMPMTLLML DIDHFKAVND
TYGHPAGDAV LREVAQTMRN ACRTTDFAAR YGGEEFCVIL PHTDGKCGRI FAERLRKRLA
SSRVEVDGKT IAVTVSIGLA TLSAAAPLSP ERLVCEADGA LYAAKAAGRN IVCEAQEPCQ
RANALRA