Gene Dvul_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1313 
Symbol 
ID4662979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1602375 
End bp1602968 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content62% 
IMG OID639819543 
Productprotein-L-isoaspartate O-methyltransferase 
Protein accessionYP_966758 
Protein GI120602358 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2518] Protein-L-isoaspartate carboxylmethyltransferase 
TIGRFAM ID[TIGR00080] protein-L-isoaspartate(D-aspartate) O-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000117774 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000182851 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCTCGTG GCATTTCCGA CGAGGCCGTG CTGGCTGCCA TGGGGTGCGT TCCGAGACAT 
CTTTTCGTGC AAGAGGCCCT TCGGGCTCAG GCATATGAAG ATCATCCGCT CCCCATCGGC
AACGGACAGA CCATCTCCCA ACCGTTCATC GTGGCGTTCA TGTCGCAGTT GCTCGAAGCC
AAGCCGGGGA TGCGTGTGCT GGAGATAGGC ACGGGCTCAG GCTACCAGGC GGCGGTGCTC
GCAGAGATGG GCCTTGATGT CTATACGGTC GAACGCATCC GTGAAATCTA CCAGACAACC
CGCGACCTGC TGCGTGCCCT GCGCTACACG CGCATCCGGT GCAGGCTTGA TGACGGAACG
CTCGGATGGC CCGAATCTGC ACCTTTCGAC CGCATCATCG TCACCGCGGG AGGCCCCGAA
ATCCCCGTCC CTCTGGTCGA ACAACTGGCA GACCCCGGCG TGATGGTGCT CCCTGTCGGT
GTGTCGCGAC GTTCGCAGGA GCTTGTCGTC GTGCGCAAAC GTGACGGAAA GCTCTTCCGT
TCCAATCGCG GTGGGGTGAG TTTCGTCGAC CTTGTCGGCT GTCACGGCTG GTAG
 
Protein sequence
MPRGISDEAV LAAMGCVPRH LFVQEALRAQ AYEDHPLPIG NGQTISQPFI VAFMSQLLEA 
KPGMRVLEIG TGSGYQAAVL AEMGLDVYTV ERIREIYQTT RDLLRALRYT RIRCRLDDGT
LGWPESAPFD RIIVTAGGPE IPVPLVEQLA DPGVMVLPVG VSRRSQELVV VRKRDGKLFR
SNRGGVSFVD LVGCHGW