Gene Dvul_1286 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1286 
Symbol 
ID4663063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1572938 
End bp1573960 
Gene Length1023 bp 
Protein Length340 aa 
Translation table11 
GC content61% 
IMG OID639819517 
Productthreonine aldolase 
Protein accessionYP_966732 
Protein GI120602332 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.78945 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.413936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCAAGA GTTTCGCCAG CGACAACACA GCAGGGGTGC ATCCGCGCAT CCTCGCCGCC 
ATGGCCTCCG CCAACGAAGG CCACGCCAAG GCCTACGGCA TGGACCCGTG GACAAGTGAG
GCTGCGGATG TCTTCCGCGG ACACTTCGGT GATGACATCG ACCTGTATTT CGTCTTTCTG
GGCACCGCTG CGAACGTGCT GGGACTCAAA TCCGTCACGC GCCCCTGGCA TTCGGTGGTC
TGCGCCGATG TGGCCCATAT CAATGTCGAT GAATGCGGCG CGCCGGAGTC GGTGACCGGG
TCGAAGTTGC AGGTCATCCC GTCGCACGAC GGTCGCATCC GGGTCATGGA CATCGTGCCC
CTCATGCACT CGCTGGGTAA TTTCCACCAC AGCCAGCCCC GTGTCATCTC CATCACCCAG
ACGACTGAAC TCGGCACGGT GTACTCGCCG GCGCAGATAC GCGCGCTGGC CGATTTCGCC
CACGCCAACG GCATGCTGCT GCACATGGAT GGTGCACGGC TGTGCAACGC GGCGGCGGCA
CTCGATACCG GGCTGGCGGC CCTCACCCGT GACACGGGGG TCGATGTGCT CTCGTTCGGC
GGCACCAAGA ACGGCATGAT GTTCGGTGAA GCCGTCATCT TCTTCAATCG TGAACTGGCA
AGCGAATTCA AGTTCATCCG CAAGCAGGGG ATGCAACTGG TCTCGAAGAT GCGCTTCATC
GCGGCGCAGT TCATCGAACT TCTGCGTGAT GGTCTGTGGC TTGAGAACGC CCGTAACGCC
AACAGCATGG CACGGCTCAT GGCTGAAAGC CTGCGCGGTC TGCCCCATGT GACCATCACC
CGGCCCGTTG AGGCAAACGC CGTGTTCGCC CGGCTTTCGC CGGAACATAT CGCGGCACTG
CAGAAGGACT TCTATTTCTA TGAGTGGGAC CCGGTGCTGC ACGAGGTGCG CTGGATGACC
AGCTTCGACT CCACCGAGGA ACAGGTCATG GAGTTCGTGC ACGCCATCAA ACGGCTGGCA
TAG
 
Protein sequence
MLKSFASDNT AGVHPRILAA MASANEGHAK AYGMDPWTSE AADVFRGHFG DDIDLYFVFL 
GTAANVLGLK SVTRPWHSVV CADVAHINVD ECGAPESVTG SKLQVIPSHD GRIRVMDIVP
LMHSLGNFHH SQPRVISITQ TTELGTVYSP AQIRALADFA HANGMLLHMD GARLCNAAAA
LDTGLAALTR DTGVDVLSFG GTKNGMMFGE AVIFFNRELA SEFKFIRKQG MQLVSKMRFI
AAQFIELLRD GLWLENARNA NSMARLMAES LRGLPHVTIT RPVEANAVFA RLSPEHIAAL
QKDFYFYEWD PVLHEVRWMT SFDSTEEQVM EFVHAIKRLA