Gene Dvul_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDvul_1256 
Symbol 
ID4664416 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfovibrio vulgaris DP4 
KingdomBacteria 
Replicon accessionNC_008751 
Strand
Start bp1535737 
End bp1536462 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content63% 
IMG OID639819487 
Productpyridoxine 5'-phosphate synthase 
Protein accessionYP_966702 
Protein GI120602302 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0854] Pyridoxal phosphate biosynthesis protein 
TIGRFAM ID[TIGR00559] pyridoxine 5'-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCATAC TCGTAGTCAA CGTCGACCAT GTGGCCACCC TGCGGCAGCA ACGCCTCGGC 
ATCGAACCAG ACCCCGTAAC CGCCGCGCAC ATGGCCGAAC TTGCAGGCGC ACGGGGCATC
ATAGTGCACC TGCGCGAAGA CCGCCGCCAC ATACAGGACA GGGACGTGTC GCTCTTGCGG
CAGACGCTGA AGACCCGCCT GCACCTCGAA ATGGCAGCTA CCGAAGAGAT GCAGGGCATC
GCCCTTGCCG AGAAGCCGCA CATGGTCTGC CTCGTCCCTG AAAAACGGGA AGAACTCACC
ACCGAAGGCG GCCTCGTGGT GGCTGGGCGC GTAGACTTCC TTCAGGCATA TGTAAAGCCG
TTCCACGAAA TCGGTATCGC CACCAGCCTG TTCATAGAGG CCGACCCCGA CCAAATTCGC
GCAGCCGCAC GCGTCGGGGT CACCCATGTG GAACTGCATA CAGGGCACTT CGCCGACGCG
CCCGATGCCG CAGAACGCAA GCGCCAGCGT GACGCCATCG TCGCTGGCAT CGGCCTTGCC
CGCACACTGG GGCTCAAGGT CAACCTCGGG CACGGCCTCA ACTACGATAA CATCTTCGAC
TTCGAAGCCG TACCCGGCAT CTGCGAATTC TCCATCGGAC ACTCCATCGT CTCGCGCGCC
GTACTCACGG GCTTCGGCCC GGCGGTGCGC GACATGGTCG ACATCATCAA CCGCTTCCCC
GGGTAA
 
Protein sequence
MPILVVNVDH VATLRQQRLG IEPDPVTAAH MAELAGARGI IVHLREDRRH IQDRDVSLLR 
QTLKTRLHLE MAATEEMQGI ALAEKPHMVC LVPEKREELT TEGGLVVAGR VDFLQAYVKP
FHEIGIATSL FIEADPDQIR AAARVGVTHV ELHTGHFADA PDAAERKRQR DAIVAGIGLA
RTLGLKVNLG HGLNYDNIFD FEAVPGICEF SIGHSIVSRA VLTGFGPAVR DMVDIINRFP
G